Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00388 ATGGCCGAGACATCCTCGGAGGAGGAGTTGAGTGTCGTGAACGACAACAACCATAAAAGTACAAATAATATCCCAATTGAGATCGTGAGTGATGAAGAAATGGCTCTCATTGAAGCTGCTTTTGCTTTAGCTTCTTCCTCTTCTGCTCGCTCTCTTTCTCTTTCTGCTTCCATTCGATCTTCTTCTTCTTCACCTTCTCCTCCTTCTCCCCTTCTTCACACCAACGCTCTTTCCATCAAATCAATCACTCTTCTCGCCAAGCGAAGGTTATCAACTGAAACTAGCAATGGCAATGGCAATGTTAACCACCCTGATATTGAAGACCTCTTGCCCAAGAAAACAAGGCTCCATGATTCATTTCTCCACCGATATAGAAGGAGCCGAGGCTTGTCCGTCACTGATCTCACTGCCGCGGAATGGTGCGAGAAACAGAAGGAATTCTCTCTTACCCGCGGTGGCCGGAGGACCACCAAGGCAATGAGAGCTGGTATTGCTAGACATGTGGAGCTTGAAGAAGAGGTTATGAAACGGGTGGCGGTGAAGATCGCCACAAAAGAAGACGGTTGGGCCCTGAAGTTTCTTAATTTTATTCATGGTGTGAATCAATTATTGTTTACAGGGTTAACTCGCGAACTGCCAATAATAGCATATATAGGCAATGTATGGATGGTGGGAGTGATTGATGAGATTCAGATGCCATTAACAAAAGAACATCATAATCCAATATTAATTGACACCAAAACTCGTGTTCGAGATACACTTCCTTCTGAAGCGCAACGAAGAAACGGAAGGTTTCAACTGATGTGTTACAAGTACTTGTGGGACAATACAATCGCCAATGATTTCCCTTCTGGAAAGTTTTTCACTTATTTTAGCTTAAACCCTCACCATATTCTTGCCGAAGATCTGCAAGTGACAATTGCTGGCTCCGATTTCTGTAAAATGCAGACCCTTGATGATATGCTGAGATATTACACAAACACCTTGAAGATGCTAGCCCCTGCTCATGATCAGCTTCTGTTAAGATATGAGTATCAAGAAGATAAGTCATTGCTGGCGGAAGATAAATTTGAGTATGATTCTGAATGGTTAAAGAATCAGATTCAAAGTTGTCTTGAGTTTTGGCATGGACAACGAGAGGCAAGCTATGCACCTGAAGATGAGCGATGGAAATGTCGATACTGTCAATTCGCCAGAGACTGCGAAGGATATGCTGAGAGTATGACACCAAAGGAAGATTCAAATGATGATACCTGCGTCACTCACGGAGAAGACATTTCTTCTCAAATCAGCTCATAA 1299 0.4311 MAETSSEEELSVVNDNNHKSTNNIPIEIVSDEEMALIEAAFALASSSSARSLSLSASIRSSSSSPSPPSPLLHTNALSIKSITLLAKRRLSTETSNGNGNVNHPDIEDLLPKKTRLHDSFLHRYRRSRGLSVTDLTAAEWCEKQKEFSLTRGGRRTTKAMRAGIARHVELEEEVMKRVAVKIATKEDGWALKFLNFIHGVNQLLFTGLTRELPIIAYIGNVWMVGVIDEIQMPLTKEHHNPILIDTKTRVRDTLPSEAQRRNGRFQLMCYKYLWDNTIANDFPSGKFFTYFSLNPHHILAEDLQVTIAGSDFCKMQTLDDMLRYYTNTLKMLAPAHDQLLLRYEYQEDKSLLAEDKFEYDSEWLKNQIQSCLEFWHGQREASYAPEDERWKCRYCQFARDCEGYAESMTPKEDSNDDTCVTHGEDISSQISS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00388 432 Gene3D - 107 402 IPR011604 -
Aip03g00388 432 Pfam Exonuclease V - a 5' deoxyribonuclease 120 233 IPR019190 GO:0045145
Aip03g00388 432 Pfam Exonuclease V - a 5' deoxyribonuclease 237 305 IPR019190 GO:0045145
Aip03g00388 432 Pfam Exonuclease V - a 5' deoxyribonuclease 310 402 IPR019190 GO:0045145
Aip03g00388 432 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g00388 432 PANTHER EXONUCLEASE V 14 413 IPR019190 GO:0045145
Aip03g00388 432 MobiDBLite consensus disorder prediction 407 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00388 Aip-Chr3 3700886 3703762 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00388 K17815 - gmx:100792136 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00388 03 3700886 3703762 Aip03g00388 03 3700886 3703762 ECH