Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00375 ATGATGATCAAAAACCAATCTCTATTGTTCTTCACAATAACACTAATAATTTCCACAACCACTATAGCACAATTATCACCAGCTATATCCCCAGTAGTTCAACCAAACCCTAAACCAACAACAACACCAGCAGCATCACCAAAACCATTGGTACCTTCATTACCAAGCAACTCACCAAGTGAGAACATTCCAGACACACCCACTGTTGACGTCATCGCCCTTCTGAGGCAAGCAAAGTCATTCAACACACTCATCAGACTCATGAAGATCACCCAATTGATCAACCAACTCAACTCTCAGCTCATCACTTCCAAGTCCGGCGGCCTCACCGTCCTCGCCCCCGACGACGCCGCCTTCTCCCAGCTCAAACCCGGCTTCCTCAACTCTCTTTCCGATGGACAGAAGCTTGAACTCGTGCAGTTCCACGTCATCTCCGACTACGTCTCGAGTTCCAACTTTGACACACTCACAAACCCGGTCAGGACACTGGCCGGAGCTAAACCGGGAAAGGTGGAACTGAATGTCATAAGCTATGGCGGCAGTGTTAACATCTCAACCGGAGCGGTTAACACTACAATTAATGGAATCATTTACACTGATAAGCATCTTGCTATCTATAAGGTTGGGAAGGTGCTTCTTCCTTTGGATTTCTTTGCGGTTGCTAAGACTCCTGCAAAGGCACCGTCTCTGGCTCCAGAACCTTCATCATCAAAGGCTCCTAAAGCTGACAAGGATGACACAGGAACATCATCGGATTCATCTTCGTCGCAGGTTAATCCCACTGAACAGAGCTCTGGCGGTGCTGTGAAGATAAATGTGGTTGCACTTGGTCTTGCATTCATGGTGGCTGCTGCTGCAACCATGCACGCTTGA 873 0.4788 MMIKNQSLLFFTITLIISTTTIAQLSPAISPVVQPNPKPTTTPAASPKPLVPSLPSNSPSENIPDTPTVDVIALLRQAKSFNTLIRLMKITQLINQLNSQLITSKSGGLTVLAPDDAAFSQLKPGFLNSLSDGQKLELVQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGAVNTTINGIIYTDKHLAIYKVGKVLLPLDFFAVAKTPAKAPSLAPEPSSSKAPKADKDDTGTSSDSSSSQVNPTEQSSGGAVKINVVALGLAFMVAAAATMHA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00375 290 MobiDBLite consensus disorder prediction 227 264 - -
Aip03g00375 290 MobiDBLite consensus disorder prediction 249 264 - -
Aip03g00375 290 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Aip03g00375 290 SUPERFAMILY FAS1 domain 63 215 IPR036378 -
Aip03g00375 290 MobiDBLite consensus disorder prediction 32 54 - -
Aip03g00375 290 Pfam Fasciclin domain 80 214 IPR000782 -
Aip03g00375 290 MobiDBLite consensus disorder prediction 30 63 - -
Aip03g00375 290 SMART fasc_3 110 215 IPR000782 -
Aip03g00375 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 280 - -
Aip03g00375 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 280 IPR045003 -
Aip03g00375 290 Gene3D FAS1 domain 54 214 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00375 Aip-Chr3 3560354 3561256 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00375 - - gmx:100819833 341.658