Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00374 ATGATGATCAAAAACCAATCTCTATTGTTCTTCACAATAACACTAATAATTTCCACAACCACTATAGCACAATTATCACCAGCTATATCCCCAGTAGTTCAACCAAACCCTAAACCAACAACAACACCAGCAGCATCACCAAAACCATTGGTACCTTCATTACCAAGCAACTCACCAAGTGAGAACATTCCAGACACACCCACTGTTGATGTCATCGCCATTCTGAGGCAAGCAAAGTCATTCAACACACTCATCAGACTCATGAAGATCACCCAATTGATCAACCAACTCAACTCTCAGCTCATCACTTCCAAGTCCGGCGGCCTCACCATCCTCGCCCCCGACGACGCCGCCTTCTCCCAGCTCAAACCCGGCTTCCTCAACTCTCTTTCCGATGGACAGAAGCTTGAACTCGTGCAGTTCCACGTCATCTCCGACTACGTCTCGAGTTCCAACTTTGACACACTCACAAACCCAGTCAGGACACTGGCCGGAGCTAAACCGGGAAAGGTGGAACTGAATGTCATAAGCTATGGCGGCAGTGTTAACATCTCAACCGGAGCGGTTAACACTACAATTAATGGAATCATTTACACTGATAAGCATCTTGCTATCTATAAGGTTGGTAAGGTGCTCCTTCCTTTAGATTTCTTTGCGGTTGCTAAGACTCCTGCAAAGGCTCCATCTTTGGCCCCAGAACCTTCTGGTTCCGCAAAGGCTCCTAAAGCTGATAAGTCATTGTCCCCAGATTCCTCTACGGAATCATCATCTCAGGTTAATCCCACTGATCAAAACTCTGGGACAATGAAAATCAGTGGATGTGGACTTGTTCTTGGTGCAGTTCTCGTGACTATATTTTCATCATAA 867 0.4591 MMIKNQSLLFFTITLIISTTTIAQLSPAISPVVQPNPKPTTTPAASPKPLVPSLPSNSPSENIPDTPTVDVIAILRQAKSFNTLIRLMKITQLINQLNSQLITSKSGGLTILAPDDAAFSQLKPGFLNSLSDGQKLELVQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGAVNTTINGIIYTDKHLAIYKVGKVLLPLDFFAVAKTPAKAPSLAPEPSGSAKAPKADKSLSPDSSTESSSQVNPTDQNSGTMKISGCGLVLGAVLVTIFSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00374 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 274 - -
Aip03g00374 288 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Aip03g00374 288 MobiDBLite consensus disorder prediction 32 54 - -
Aip03g00374 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 274 IPR045003 -
Aip03g00374 288 SUPERFAMILY FAS1 domain 63 215 IPR036378 -
Aip03g00374 288 MobiDBLite consensus disorder prediction 30 63 - -
Aip03g00374 288 MobiDBLite consensus disorder prediction 246 267 - -
Aip03g00374 288 MobiDBLite consensus disorder prediction 227 267 - -
Aip03g00374 288 Pfam Fasciclin domain 80 214 IPR000782 -
Aip03g00374 288 SMART fasc_3 110 215 IPR000782 -
Aip03g00374 288 Gene3D FAS1 domain 54 214 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00374 Aip-Chr3 3556707 3557887 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00374 - - gmx:100790242 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00374 03 3556707 3557887 Aip03g00374 03 3556707 3557887 ECH