Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00373 ATGAAGAAGCAGCAGGTAACAGGATTGTACCTTGTCTTGCTAGTGTTGTGCTGCACCATCATTCAGGCATTTTCACAAACACCTGCAGCGTCTCCAAAACCAGCACCAAAAGCAGCAGCATCACCACCAAAGGCAACAACAAAAAAAGCACCGTCACCAAAGCCATTAGTGCCAACACTGCCACAGTCACCAGACTCATCAGATGCAGCACCAGACGACATCACAAAGATTCTGAAGAAGGCGAAGATATTCAACGTCCTAATCCGTCTGATGAAAACAACAGAGATAATGAACAACATCAACTCGCAGCTCATAACCGCAAAGACGGGAGGCATAACGATCCTGGCGCCGGACGACGACGCCTTCTCGAATCTGAAGGCAGGATTCCTGAACTCATTGGACGAAAAACAGAAGATAGAGCTGGTGCAGTTCCACATACTGCCGGAGTTTGTGGCCAGCAACAACTTCGACTCTTTGGCGAATCCGGTGCAGACGGTGGCAGGAAAAGATCCGGAGAGGCTGCCGCTGAACGTGAATGCGTTGGGGAACAGTGTGAACATATCAACGGGAGTGGTGAATGCGTCGGTGGTGGGAGTTGTGTACTCCGATAACAAACTCGCCATATACAAAGTGGATAAGGTGCTTCTTCCTTTGGATTTCTTTCAGAAAGCTAAGCCTCCTGCTTTGGCTCCCACCGCTCTCGCAAAGGCACCTAAGGCCGCCAAAGAGAACACCGCCGCCGACGATCAAGACGGTGACGCCACTCCCGCCGATCAGCAAAAATCTGCGGCTGTGATTAATGGAAAACCATTGGTGTCAGTTGCGATAGCTTCTCTCGTAGTAGTGCCAATGATGATGTGGAGCTGA 867 0.5029 MKKQQVTGLYLVLLVLCCTIIQAFSQTPAASPKPAPKAAASPPKATTKKAPSPKPLVPTLPQSPDSSDAAPDDITKILKKAKIFNVLIRLMKTTEIMNNINSQLITAKTGGITILAPDDDAFSNLKAGFLNSLDEKQKIELVQFHILPEFVASNNFDSLANPVQTVAGKDPERLPLNVNALGNSVNISTGVVNASVVGVVYSDNKLAIYKVDKVLLPLDFFQKAKPPALAPTALAKAPKAAKENTAADDQDGDATPADQQKSAAVINGKPLVSVAIASLVVVPMMMWS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00373 288 PANTHER FASCICLIN DOMAIN PROTEIN 9 286 - -
Aip03g00373 288 Gene3D FAS1 domain 58 217 IPR036378 -
Aip03g00373 288 MobiDBLite consensus disorder prediction 28 71 - -
Aip03g00373 288 SUPERFAMILY FAS1 domain 57 218 IPR036378 -
Aip03g00373 288 MobiDBLite consensus disorder prediction 240 261 - -
Aip03g00373 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 286 IPR045003 -
Aip03g00373 288 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Aip03g00373 288 Pfam Fasciclin domain 84 217 IPR000782 -
Aip03g00373 288 SMART fasc_3 113 218 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00373 Aip-Chr3 3554288 3555440 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00373 - - gmx:106794109 323.553