Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00371 ATGAAGCAACCTTTGTTCTCCACCACACTTCTCATCCTCTTCACCTCCTTCTACTCAACCACCACATTAGCACAACCAATTGCATTATCACCCTCAAAATCATCAGATTCCTCTGACTCTTCTTCCACTGATGACATGATCAAGATTCTAAGGAAGGCGAAATCATTTAATGTCCTAATCCGGTTACTCAAAACCACACAACTCATCAACCAAATCAATTCACAGCTCATCGCCACAAACAATGGTTATGGTGGCCTAACAATCTTTGCACCAGATGATGCTAGCTTCTCACAACTCAAACCAGGCCTCCTCAACTCTCTTGGTGATAACCAGAAGATGGAACTCCTACAGTTCCATCTTCTTCCGGTTTACATCTCAAGCTCAAACTTCGATTCTCTAACCAATCCTGTGAGGACACTAGCCGGTGAAAGCTCCGAAAGGCTGCAACTAAATGTGACTGCATTTGGAAACAGTGTGAACATTTCAACTGGTGTGCCTAAGCCACCGGCTCCTGCTCCTTCTCCTGCAATTGCGCCAAAAACTAATAACTCAACCATAGACGATGAAAATGATCTTGGAACTTCTAAGCACAGCTCTGGAGCAATCCATTTGGTGATAAGCACTCAAGGAACAAAATTGGTGTCATTTGGAGTTGCTTTAGTTGTTGCATTTGTAACCATTTCAAAATGA 690 0.429 MKQPLFSTTLLILFTSFYSTTTLAQPIALSPSKSSDSSDSSSTDDMIKILRKAKSFNVLIRLLKTTQLINQINSQLIATNNGYGGLTIFAPDDASFSQLKPGLLNSLGDNQKMELLQFHLLPVYISSSNFDSLTNPVRTLAGESSERLQLNVTAFGNSVNISTGVPKPPAPAPSPAIAPKTNNSTIDDENDLGTSKHSSGAIHLVISTQGTKLVSFGVALVVAFVTISK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00371 229 SMART fasc_3 87 212 IPR000782 -
Aip03g00371 229 Gene3D FAS1 domain 20 207 IPR036378 -
Aip03g00371 229 PANTHER FASCICLIN DOMAIN PROTEIN 166 223 - -
Aip03g00371 229 ProSiteProfiles FAS1/BIgH3 domain profile. 43 209 IPR000782 -
Aip03g00371 229 Pfam Fasciclin domain 55 162 IPR000782 -
Aip03g00371 229 MobiDBLite consensus disorder prediction 177 194 - -
Aip03g00371 229 PANTHER FASCICLIN DOMAIN PROTEIN 37 165 - -
Aip03g00371 229 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 166 223 IPR045003 -
Aip03g00371 229 SUPERFAMILY FAS1 domain 42 162 IPR036378 -
Aip03g00371 229 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 37 165 IPR045003 -
Aip03g00371 229 MobiDBLite consensus disorder prediction 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00371 Aip-Chr3 3545200 3545982 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00371 - - aip:107632361 281.182