Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00366 ATGAGAGAAGCTACAAAGATTCTAGTGTTCCATTTGGTTTGGTTCCTCTGCATTCATGTCCCTCCTATGTTTTGTGCCAATGTAACATATGATCACAGAGCATTGCTCATTGATGGCAAGCGTAGAGTCTTCATTTCTGGTTCTATTCATTACCCTCGTAGCACTCCTCAGATGTGGCCAGACCTGATTCAGAAGTCGAAAGATGGAGGGCTTGATGTTATTGAGACTTATGTTTTTTGGAACTTTCATGAACCAGTTAGAGGGCAGTATTATTTTGAAGGAAGGGGTGATTTGGTAAATTTTGTAAAGTTAGTAGCAGCAGCAGGATTATATGTACATCTACGTATTGGACCTTATGCTTGTGCTGAATGGAACTATGGAGGTTTCCCTCTATGGCTGCATTTTATTCCAGGAATTAAATTCCGTACTGATAATGAACCTTTTAAGGCAGAAATGCAGAGATTCACTGCTAAGATTGTGGATATGATGAAGCAAGAAAATCTCTATGCTTCACAGGGAGGACCTATTATTTTATCTCAGATTGAGAATGAGTATGGAAACATTGATAAACCCTATGGTGCTGCTGGAAAATCCTACATAAAATGGGCAGCATCAATGGCTACATCCCTTAATACAGGGGTACCTTGGGTCATGTGCCAGCAACCAGATGCTCCTGATCCTATGATTAACACATGTAATGGATTTTACTGTGATCAATTCACACCAAATTCAAATGCAAAGCCAAAGATGTGGACTGAGAATTGGAGTGGATGGTTTCTTTCATTTGGAGGTGCTATGCCTTATAGACCTGTGGAAGATATTGCATTTGCTGTGGCACGTTTTTACCAAAGAGGTGGAACTTTTCAAAATTACTATATGTACCATGGAGGAACCAACTTTGGCAGGACTAGTGGTGGACCTTTCATTTCCACTAGTTATGATTATGATGCACCCATTGATGAGTATGGTATTATTAGACAACCAAAATGGGGCCACCTTAGAGATTTGCACAAGGCCATTAAGCTTTGTGAAGAAGCACTTATAGCTACTGATCCAACAATTACATCTCTTGGTTCAAATCTAGAGGCTGCAGTATACAAATCAGGAACTGTGTGTGCTGCTTTTCTTGCAAACATTGGCACATCAGATTCAACAGCAAATTTCAATGGAAATTCATATCAGTTGCCAGCATGGTCTGTGAGCATCTTACCAGATTGCAAGAATGTTGTGCTTAACACTGCAAAGATTAATTCTGCATCTACAACTTCAAGCTTCATAACTCAATCTTTGAAACTGAAGGAGGATGGTGGTGGTGCTTTAGAAGATTCTAGCAGTGAATGGAGTTGGATAAGTGAACCAATTGGAATTTCAAAGAATGATTCATTCTCAAAATTTGGATTAGTAGAGCAAATAAATACCACTGCTGATAAGAGTGACTATTTGTGGTACTCACTAAGCATTGATTTTGAAGATGATGTTAGTGCTCAAACTGTTCTTCACATTGAATCCCTTGGACATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAGTGGAAAAGGAAACAGTGGCAATGCTAAAGTCAATGTGGATATCCCCATCACACTTGTAGCTGGGAAGAACACAATTGATCTCTTGAGTTTAACTGTGGGACTTCAAAACTATGGATCTTTCTTTGACACATGGGGTGCTGGGATCACTGGACCAGTGACATTGAAGGGATTGAAGAATGGCACTACTATTGACCTCTCCTCCCAGCAATGGACATATCAGATTGGTCTTCAAGGTGAAGACTTAGGTCTATCTAGTGGAAGTGTTGGACAGTGGAACTCACAATCAAACTTACCTAAGAATCAACCCTTGACTTGGTACAAGACAAACTTTGTTGCTCCCTCTGGCAATGATCCGGTTGCAATCGACTTCACTGGAATGGGGAAAGGAGAAGCTTGGGTGAATGGACAGAGCATTGGAAGATTCTGGCCTACATATGTCTCTCCAAATTCTGGTTGTGCAACTTCATGCAATTATAGAGGATCTTATAGTTCATCCAAATGCCTCAAGAACTGTGGAAAGCCATCACAAACATTATACCATGTCCCAAGATCATGGTTGCAAACAGATAGCAACACTCTTGTGTTGTTTGAGGAAAGTGGAGGTGACCCTACACAAATCTCTTTTGCTACAAAGCAGATAGGAAGCTTGTGCTCACATGTATGA 2220 0.4059 MREATKILVFHLVWFLCIHVPPMFCANVTYDHRALLIDGKRRVFISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNFHEPVRGQYYFEGRGDLVNFVKLVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMQRFTAKIVDMMKQENLYASQGGPIILSQIENEYGNIDKPYGAAGKSYIKWAASMATSLNTGVPWVMCQQPDAPDPMINTCNGFYCDQFTPNSNAKPKMWTENWSGWFLSFGGAMPYRPVEDIAFAVARFYQRGGTFQNYYMYHGGTNFGRTSGGPFISTSYDYDAPIDEYGIIRQPKWGHLRDLHKAIKLCEEALIATDPTITSLGSNLEAAVYKSGTVCAAFLANIGTSDSTANFNGNSYQLPAWSVSILPDCKNVVLNTAKINSASTTSSFITQSLKLKEDGGGALEDSSSEWSWISEPIGISKNDSFSKFGLVEQINTTADKSDYLWYSLSIDFEDDVSAQTVLHIESLGHALHAFINGKLAGSGKGNSGNAKVNVDIPITLVAGKNTIDLLSLTVGLQNYGSFFDTWGAGITGPVTLKGLKNGTTIDLSSQQWTYQIGLQGEDLGLSSGSVGQWNSQSNLPKNQPLTWYKTNFVAPSGNDPVAIDFTGMGKGEAWVNGQSIGRFWPTYVSPNSGCATSCNYRGSYSSSKCLKNCGKPSQTLYHVPRSWLQTDSNTLVLFEESGGDPTQISFATKQIGSLCSHV 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00366 739 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Aip03g00366 739 Pfam Beta-sandwich domain in beta galactosidase 347 416 IPR041392 -
Aip03g00366 739 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Aip03g00366 739 PANTHER BETA-GALACTOSIDASE 7 739 - -
Aip03g00366 739 PANTHER BETA-GALACTOSIDASE RELATED 7 739 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 SUPERFAMILY Galactose-binding domain-like 400 576 IPR008979 -
Aip03g00366 739 Gene3D - 428 574 - -
Aip03g00366 739 Gene3D - 592 736 - -
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Aip03g00366 739 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Aip03g00366 739 Gene3D Glycosidases 23 343 - -
Aip03g00366 739 SUPERFAMILY Galactose-binding domain-like 588 736 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00366 Aip-Chr3 3519998 3527854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00366 25 697 Glycoside Hydrolase AT2G28470 76.765 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00366 - - gmx:100793198 1343.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00366 03 3519998 3527854 Aip03g00366 03 3519998 3527854 ECH