Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00365 ATGGCAAGTAGAAAGTGGACCATCTTGGTGGCATTCTTCATATTGCTTATAGCCATGGAAGCTGCCATTGTGAATGCTCAAGGGAAAGGTAATGGCAATGGCAATGGTGACTATGGCAAAGGGAATAATGACAAAGGGAATGGTAAGGATAATGGAAAGCAAGATGATAAGGGCAAGAACAAGGACAAGAGCAAGGACAAGAACAAGGACAAGGGGAAGGGGGAAGAGAAGCCTCCAAAGAAGAAGTATGATGAATCTTCAGACTATGAGAAGCTTTCACCTCTGCCAACCGGACAAGAGCGAGGTTTCTGTAAGGCGAAAACTGCTTGCCAGTTCAAGACACTCGTGTGTCCGGCCGAGTGTAACCAAAGGAAGCCAAAGAAGAACAAGCAGCAGAAGGGTTGTTTCTTGGATTGTAGCAGCAAATGTGAAGCCACTTGCAAGTATAGAAAAGCTAACTGTGATGGATATGGCTCTCTTTGTTATGATCCTCGCTTCGTTGGAGGTGATGGTGTTATGTTCTACTTCCATGGTGCCAAGGGAGGAAACTTTGCCATAGTATCCGATCATGACTTCCAAATCAATGCTCACTTCATTGGAACTCGGCCACAAGGAAGGACTCGCGACTACACATGGGTGCAGGCTCTTGCTGTGATGTTTGACTCACACACTCTTGACATTGCAGCTAGGAGAGTATCTCAATGGGATGACAAAGTTGACACTCTCATAGTGAAGTGGGATGGTAAATTAGTTAGCATTCCAACCGATGGAGAAGCCGAATGGAGGGCTAATGGTGATGACAGGGAAGTGATCATTGAGAGAACTGATGATACAAACAGTTTGAGAGTGAAAGTTTCTGGTTTGGTTGAAATGGACATAAGGGCAAGGCCAATTGGAGAAAAAGAGAACAAGGTTCACAACTATCAATTGCCATCAGATGATGCTTTTGCTCATCTTGAGACACAATTCAGGTTCAAGAACCTTTCAGATTCTGTTGAAGGTATTTTGGGACAGACTTATAGGCCAAACTATGTTAGCACTGTCAAGAAAGGGGTTGCTATGCCCATGATGGGTGGAGAGGACAAGTATGAGACTAGGACTCTCTATTCGACTACCTGCAAACTCTGCCGGTTTGAGAGGCCAACTGAGATTGCTTCAAGTGAAGGATTGATTGCTCAGTACTGA 1185 0.4473 MASRKWTILVAFFILLIAMEAAIVNAQGKGNGNGNGDYGKGNNDKGNGKDNGKQDDKGKNKDKSKDKNKDKGKGEEKPPKKKYDESSDYEKLSPLPTGQERGFCKAKTACQFKTLVCPAECNQRKPKKNKQQKGCFLDCSSKCEATCKYRKANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDHDFQINAHFIGTRPQGRTRDYTWVQALAVMFDSHTLDIAARRVSQWDDKVDTLIVKWDGKLVSIPTDGEAEWRANGDDREVIIERTDDTNSLRVKVSGLVEMDIRARPIGEKENKVHNYQLPSDDAFAHLETQFRFKNLSDSVEGILGQTYRPNYVSTVKKGVAMPMMGGEDKYETRTLYSTTCKLCRFERPTEIASSEGLIAQY 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00365 394 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 384 - -
Aip03g00365 394 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 384 - -
Aip03g00365 394 MobiDBLite consensus disorder prediction 43 89 - -
Aip03g00365 394 MobiDBLite consensus disorder prediction 29 94 - -
Aip03g00365 394 Pfam Root cap 322 378 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00365 Aip-Chr3 3513162 3514552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00365 - - gmx:100817693 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00365 03 3513162 3514552 Aip03g00365 03 3513162 3514552 ECH