Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00363 ATGACAAAGAAATTACGGTCTGATTCTTCCATACAAGAGGATGATGAGAAAGTGAGTAGCTTTGTGAGGATGGATTCAAGGGAAGGAGTGAATGATGGTTTTTCTAGGAATGGACCAAGTGATTCGCTTCTCCCTGGTCTTATTGACGATGTTGCGCTTAATTGCCTTGCTTGGGTTAGTAGATCTGATTATACTTCACTATCATGCATAAATAAGAGGTACAACTTGCTGATTAAGAGTGGCTATTTATCTGAGTTGAGGAAGAAATTGGGAATTGTTGAGTTGGAGCATTTGGTTTATTTAGTTTGCGATCCGAGAGGGTGGGAGGCATTTGATCCTAAGAGAAATAGGTGGGTAGTGCTACCTAGGATACCTTGCGACGAGTGTTTTAACCATGCAGACAAGGAGTCCTTGGCTGTGGGCAGTGAGCTGTTGGTTTTCGGCCGTGAATTGATGGATTTTGCCATTTGGAAGTATAGCTTGGTTTGTCGTGAATGGGTGAAGTGTGAGGGCATGAACCGACCTCGCTGTTTGTTCGGATCTGGCAGTCTTGGTTCGATTGCTATCGTTGCTGGTGGAAGCGATAGGTATGGAACTGTTCTAGATTCTGCTGAGTTGTATGACTCTTCATCGGGTACATGGGAATTGTTACCACACATGCATACGCCGCGTAGATTGTGCTCTGGTTTCTTTATGGACGACAAATTCTACGTGATTGGTGGAATGTCGAGTCCTACTGCTTCATTGACTTGTGGGGAGGAGTATAATCTTAAGACAAGAAGTTGGCGGAAAATCGAGGGCATGTATCCGTATGTCAATGGGGCTGCTCAAGCACCTCCACTTGTGGCGGTGGTGGATAATCAATTGTATGCAGTTGAGCATCTAACCAACATGGTGAAGAAATACGACAAGGACAGTAATTCATGGAGCGAATTGGGAAGACTTCCAGTTCGGGCCGATTCTTCGAACGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTTGTTGTTGGCGGACAAAGAGGTCCAGAAGGCGAAGCTGTTGTACTGAATTCATGGTGTCCTAAAACAGGTGTCAGCAATGGAACCATCGATTGGCAGGTACTTGGCGTGAAGGAGCACGTCGGAGTGTTTGTGTACAATTGCGCCGTTATGGGTTGGTCCGGGGAGATGCGTCTAGATTGA 1191 0.4601 MTKKLRSDSSIQEDDEKVSSFVRMDSREGVNDGFSRNGPSDSLLPGLIDDVALNCLAWVSRSDYTSLSCINKRYNLLIKSGYLSELRKKLGIVELEHLVYLVCDPRGWEAFDPKRNRWVVLPRIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLVCREWVKCEGMNRPRCLFGSGSLGSIAIVAGGSDRYGTVLDSAELYDSSSGTWELLPHMHTPRRLCSGFFMDDKFYVIGGMSSPTASLTCGEEYNLKTRSWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVKKYDKDSNSWSELGRLPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPKTGVSNGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMRLD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00363 396 SUPERFAMILY F-box domain 43 131 IPR036047 GO:0005515
Aip03g00363 396 SUPERFAMILY Kelch motif 107 346 IPR015915 GO:0005515
Aip03g00363 396 Pfam Kelch motif 175 220 IPR006652 GO:0005515
Aip03g00363 396 Pfam Kelch motif 223 268 IPR006652 GO:0005515
Aip03g00363 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 35 388 - -
Aip03g00363 396 Gene3D - 98 376 IPR015915 GO:0005515
Aip03g00363 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 35 388 - -
Aip03g00363 396 SMART kelc_smart 187 234 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00363 Aip-Chr3 3492094 3494455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00363 - - gmx:100792139 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00363 03 3492094 3494455 Aip03g00363 03 3492094 3494455 ECH