Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00356 ATGCCGAGCCATAAACGACTCGTCGTTTTACTCTCCCTCACTACTCTACTTCTCTTCTCCTCCTTCACCCTCATTTCAACGAAGAAATCCGCTCAAAACGACAATACCGCCAACGAAAACGACGACGAGGATCTCAGCTTCCTCGAGGAACCGGACGAAGCTGCCACCACCGCACACCACCACGCCGACTCCAACTTACCAGATCCCGACGGCGACGACGAGGACCTCGAACTCGACGAAGACGACGACAACGATTACGGCGACTTCTCCTCTTACTCCCCCTCGCACTTCGAGGCAGAACAACCGCCGTGGGATGTGGACGACAAAGACGTTGTCGTATTGAAGGAACGGAACTTCACGACCGTAATTGAGAACAACCAATACGTGATGGTGGAATTCTACGCGCCATGGTGCGGACATTGCCAAGCGTTGGCGCCGGAGTACGCCGCTGCCGCCACGGAGCTGAAGAACTACGGCGTCGTCCTGGCAAAGATTGACGCCACGGCGGAGCAAGAAATGGCGCACGAGTACGACGTTCAGGGCTTTCCCTCCATCTTCTTCTTCGTCGATGGAGAGCACAAGCCTTACACTGGCCACAGGACAAAGGATGGTATTGTGGCTTGGGTTAAGAAGAAGATAGGGCCTGGGGTGTACAACATTAGTACGGCGGATGATGCGGAACGCATATTGACGTCTGAGAATAAAGTTGTCTTGGCCTTCCTCACCACTTTAGTTGGTTCTGAGAGTGAGGAGCTAGCTGCTGCATCCAAACTTGAGGATAATGTCAATTTTTATCAAACTGTGGTTCCTGATGTTGCAAAGCTTTTCCATATTGACCCAGAAGCTAAACGCCCTGCTTTGGTGTTGGTTAAGAGGGAGGATGAGAAGCTCAGCTATTTTGATGGCAAATTCGTAAAAGCGGAAATAGCAGACTTTGTAGCCATCAACAAGCTTGCCTTGGTTACAACTTTCTCAAAAGAAACTGCCCCATTAATCTTTGAAAGTAAAATCAAGAAACAGTTGTTGCTGTTTGTGACTAAGAAAAATTCAGATAAGTTTTTTCCAATTTTCGGAGAAGCAGCAAAACTTTTCAAGGGGAAGCTGGTCTTTGTTCATGTGGACATGGACAATGAAGATGCTGGAAAGCCTGTAGCAAGCTTCTTTGGCATCACCGGAAAAGGTCCCAAAGTACTTGCATATATTGGAAATAATGATGGGAGAAAATTTCTATATGATGGTGAGGTGACTGTTGACAATATTAAGGCATTTGGTGAAGATTTTCTTCATGACAAGTTAAAACCTTTCCTCAAGTCAGATCCAGTTCCAGAAACGAATGATGGTGACGTAAAAATTGTTGTCGGGGATAACTTCGATGACATTGTCTTGGATGAGTCAAAGGATGTTCTCCTTGAGGTTTATGCTCCTTGGTGTGGCCACTGCCAAGCACTGGAACCAACATACAATAAACTTGCAAAGCATCTTCGTGGTATTGAATCTATTGTAATAGCCAAGATGGATGGTTCAACAAACGAGCATCCCAGGATAAAGACTGACGGATTCCCGACAATTCTCTTCTTCCCAGCAGGAAAAAAGAGTTCTGACCCTATTACTGTTGATGTGGACCGTACGGTGGCAGCATTTTATAAGTTCCTGAGGAAACATGCATCAATCCCATTCAAGCTCAAGAAACCAACCTCAACTTCTAAAGCAGGTTCTGGTCTCAAGGATGAACTATGA 1737 0.4652 MPSHKRLVVLLSLTTLLLFSSFTLISTKKSAQNDNTANENDDEDLSFLEEPDEAATTAHHHADSNLPDPDGDDEDLELDEDDDNDYGDFSSYSPSHFEAEQPPWDVDDKDVVVLKERNFTTVIENNQYVMVEFYAPWCGHCQALAPEYAAAATELKNYGVVLAKIDATAEQEMAHEYDVQGFPSIFFFVDGEHKPYTGHRTKDGIVAWVKKKIGPGVYNISTADDAERILTSENKVVLAFLTTLVGSESEELAAASKLEDNVNFYQTVVPDVAKLFHIDPEAKRPALVLVKREDEKLSYFDGKFVKAEIADFVAINKLALVTTFSKETAPLIFESKIKKQLLLFVTKKNSDKFFPIFGEAAKLFKGKLVFVHVDMDNEDAGKPVASFFGITGKGPKVLAYIGNNDGRKFLYDGEVTVDNIKAFGEDFLHDKLKPFLKSDPVPETNDGDVKIVVGDNFDDIVLDESKDVLLEVYAPWCGHCQALEPTYNKLAKHLRGIESIVIAKMDGSTNEHPRIKTDGFPTILFFPAGKKSSDPITVDVDRTVAAFYKFLRKHASIPFKLKKPTSTSKAGSGLKDEL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00356 578 CDD PDI_a_PDI_a'_C 449 551 - -
Aip03g00356 578 Gene3D Glutaredoxin 104 215 - -
Aip03g00356 578 MobiDBLite consensus disorder prediction 53 67 - -
Aip03g00356 578 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 573 - -
Aip03g00356 578 TIGRFAM ER_PDI_fam: protein disulfide isomerase 109 578 IPR005792 GO:0003756
Aip03g00356 578 PRINTS Thioredoxin family signature 129 137 - -
Aip03g00356 578 PRINTS Thioredoxin family signature 137 146 - -
Aip03g00356 578 PRINTS Thioredoxin family signature 178 189 - -
Aip03g00356 578 ProSiteProfiles Thioredoxin domain profile. 95 214 IPR013766 -
Aip03g00356 578 PANTHER PROTEIN DISULFIDE ISOMERASE 4 573 - -
Aip03g00356 578 Gene3D Glutaredoxin 318 442 - -
Aip03g00356 578 Gene3D Glutaredoxin 216 317 - -
Aip03g00356 578 ProSiteProfiles Thioredoxin domain profile. 435 556 IPR013766 -
Aip03g00356 578 Gene3D Glutaredoxin 443 557 - -
Aip03g00356 578 CDD PDI_b_family 217 316 - -
Aip03g00356 578 CDD PDI_a_family 114 209 - -
Aip03g00356 578 SUPERFAMILY Thioredoxin-like 315 446 IPR036249 -
Aip03g00356 578 MobiDBLite consensus disorder prediction 31 103 - -
Aip03g00356 578 ProSitePatterns Thioredoxin family active site. 130 148 IPR017937 -
Aip03g00356 578 ProSitePatterns Thioredoxin family active site. 469 487 IPR017937 -
Aip03g00356 578 SUPERFAMILY Thioredoxin-like 102 214 IPR036249 -
Aip03g00356 578 Pfam Thioredoxin 111 211 IPR013766 -
Aip03g00356 578 Pfam Thioredoxin 449 534 IPR013766 -
Aip03g00356 578 SUPERFAMILY Thioredoxin-like 445 556 IPR036249 -
Aip03g00356 578 MobiDBLite consensus disorder prediction 68 87 - -
Aip03g00356 578 CDD PDI_b'_family 328 428 - -
Aip03g00356 578 TIGRFAM pdi_dom: protein disulfide-isomerase domain 115 212 IPR005788 GO:0003756
Aip03g00356 578 Pfam Thioredoxin-like domain 252 423 - -
Aip03g00356 578 SUPERFAMILY Thioredoxin-like 218 328 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00356 Aip-Chr3 3448968 3453008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00356 K09580 - gmx:100785630 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00356 03 3448968 3453008 Aip03g00356 03 3448968 3453008 ECH
Aip08g00512 08 4128105 4132013 Aip03g00356 03 3448968 3453008 ECH
Aip08g00512 08 4128105 4132013 Aip03g00356 03 3448968 3453008 PCT