Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00335 ATGGGTTTCGGGCGAAATTCGACAGAAGGGATGGTGATCCAAGACTATGTAGGATCAAAGAACAACAAAGTGATGAAATCCCAAAGGAGTGGTGCACCAGCAAAGTTGGTGACAGCACTAACATGTCTCCAATTCTTCTTTGCAGTTTATGCAACATTCTTATTATATTACATGGGACCTTCCATTGATCTAAGAACATCAAAGCCAGATTTCACATGGGCCACAAGAATTGCAAACCAATGGAAGCAATACATGATCACACCCCATGTTGTTGGACACTACCAAGAAGCTGCTTCTTCTCTCATAAGAGAAGATAATAGTAATAATCATAATATGAACATTCTTGTTCCTCCTCATCAACAAGAACAACCTTTGAACCAATCACAAGTTTGTGAGTATGAGAAGATTGATTTCATGCAGAAGAAGTCCAATGATGTTCAAATGATGAAGCTGAAGAGGGAGCTGTATGATGAGGTTTTGGAGTTTCAAAGCAGAAGCATTGGAACTGAGACATTACCTCAGTTAATGGCAATGAAATCCAAGTGGGACATAAAGGGAAGTAGTAACCGGAAACCAAAGATCACAGTTTTGTTGAACCATTTCAAGAGAAAGACACTTTGTGCACAGATTGATTCATTGCTACAACAAACTCTCCCTTTTCACCATGCTTGGGTGCTATCATTTGGTAGCCCAAATGAAGTTTCCTTGAAGAGAATTGTTGAAAGCTACAATGATTCAAGGATCAGCTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCACTACAAACAGAATCTGATCTTGTATACATTGTTGATGATGACATGATTCCAGGGAAGAAAATGCTTGAGATTCTAGCACATGTTGCTGGGACTGAGAAGTACAAGAACTCAGTGTTGGGAAGTATTGGGAGGATTTTGCCATTTAGGCAGAAAGATTTTACATTTCCAAGTTATAGAAAGTTTAGGTCTAAAGAAGCAGGGTTGTATTTGCCTGATCCTGCTTATGATATCACTGTTGATAAGATTCTGCAGGTTGATTTTCTTTCTAGCTCTTGGTTTCTCTCTGCTCAACTTGTTAAGACCCTCTTCATTGAGACTCCTTTTACTTTCTCCACTGGTGAAGATCTGCATTTGAGCTATCAGCTTCAAAAGTACCAGAATGCAGGGTCATTTGTTGTCCCAGTTGACCCTAATGACAAGGAAACATGGGGTGACAGTGAACATAGGCTAGCCTATGTATCAGAAACCACAGTGATATTCAAGGACATAGTTCAAGTTAGAGATGATCAATGGTGGAAAGCACTTTCCACAGGCTATGTTACACAATGGGCAGCAATGTACCCTCAAAACATTGACGCCCTCTTCTACGCTCACACACTTGACCATGTTAAAGCACTTCAACCACTTCTTGACAAGTTCAGGTCTACAGTGGGTAAAAAGGCCTACATTGTGGTCTCGGGTGGGAAATTTTGCCCGTGCGAGGATGCTGCAAGGGCATTGAAGTGGCCATTGTTGGTGTGCAAGGAGAGGAGGTTCAAGATCTTTGACTTGGGAATAGAGGCCATTTCCGGGGTCTCGGATTCAGAGGTGCCGGTGATACAGGCAGTGTATTCTAGCATGAAAGGTTTGATCAAGATTCATAATCCTAGTGTTGTGATCACAGTGGATGACATTGATCCTCATGTGAGGAAGGCTCTCAAGATGGCATCAGAGAGCACTTCTAATGCTACTACTTTAGTGTTGTTGCCCAGAGCTTCTGTCACAAAAGTGCTTTGGATGTCTGATCTCCGTTCAACTGCATTGCCAAATTGGAACAAGATGAGACTTTCTATCAACATCATCACCCAAAATAGAGTAACTTCACTAACAAGGCTCCTCAAATCTCTAAGCAATGCATACTATCTTGGTGATGAAATTCCCATAACCTTCAACATGGATAGCAAGGTAGATGAGGCAACAATAAAGCTAGTGGGCTCATTTGAGTGGCCTCATGGGCCCAAAACTCTAAGAAGGAGGATCATCCAAGGTGGGCTCATTAGGGCAGTTAGTGAGAGTTGGTACCCATCCAATGATGATGACTTTGGGCTTTTACTTGAAGATGACATTGAAGTTTCCCCATACTACTACCTTTGGATCAAATATGCATTATTAGCATACCACTATGATCCACAAGTTTCTCTCCCTGAATTGTCCTCAATTTCACTCTACACACCAAGGCTTGTTGAGGTTGTTAAAGAAAGGCCCAAATGGAATGCCACTGAATTCTTCAAAAACATTCATCCAAACACACCTTACCTACACCAATTACCTTGTTCTTGGGGGGCAGTGTTCTTCCCTAAACATTGGAGAGAATTCTATGTTTACATGAACATGAGGTTCACTGAGGATGCTAAAACAAACCCGGTTCAAATCCCAAGGTCAAGAACAAATGGGTGGCAAGCATCATGGAAAAAATTCCTAATTGACATGATGTACCTTAGAGGGTATGTTAGTCTTTACCCTAATTTCCCTAACCAAGCTAGCTTCTCAACCAATCACATGGAGCCAGGTGCACACATTAGTGCTAAGGACAATGTTGTCAAACATAACAAACAAGACTTTGAGGTTCCATTAATGAGTCAAGATTTTAGAGAATTGCTACCTAGTTTGAAGATGCCACCAGCTTCAAGATTACCATCATTGAACCTATTCAATCAACCTGTTTCTTTAAAGGGTCTTAAAGCTGCTGGTGCTAAGTTGGGTCAAGATGTTCTAAGGTGTAACAATGTTTCTGAGGTTGTAGCTGTGGATCAAGATACTGGTCTACCACAACGCTGCTCCAAATTCTGA 2847 0.4127 MGFGRNSTEGMVIQDYVGSKNNKVMKSQRSGAPAKLVTALTCLQFFFAVYATFLLYYMGPSIDLRTSKPDFTWATRIANQWKQYMITPHVVGHYQEAASSLIREDNSNNHNMNILVPPHQQEQPLNQSQVCEYEKIDFMQKKSNDVQMMKLKRELYDEVLEFQSRSIGTETLPQLMAMKSKWDIKGSSNRKPKITVLLNHFKRKTLCAQIDSLLQQTLPFHHAWVLSFGSPNEVSLKRIVESYNDSRISFISSSYDFKYYGRFQMALQTESDLVYIVDDDMIPGKKMLEILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKILQVDFLSSSWFLSAQLVKTLFIETPFTFSTGEDLHLSYQLQKYQNAGSFVVPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQNIDALFYAHTLDHVKALQPLLDKFRSTVGKKAYIVVSGGKFCPCEDAARALKWPLLVCKERRFKIFDLGIEAISGVSDSEVPVIQAVYSSMKGLIKIHNPSVVITVDDIDPHVRKALKMASESTSNATTLVLLPRASVTKVLWMSDLRSTALPNWNKMRLSINIITQNRVTSLTRLLKSLSNAYYLGDEIPITFNMDSKVDEATIKLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSNDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLPELSSISLYTPRLVEVVKERPKWNATEFFKNIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKTNPVQIPRSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLMSQDFRELLPSLKMPPASRLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNVSEVVAVDQDTGLPQRCSKF 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00335 948 PANTHER OSJNBA0004B13.7 PROTEIN 24 948 - -
Aip03g00335 948 PANTHER - 24 948 - -
Aip03g00335 948 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 175 402 IPR029044 -
Aip03g00335 948 SUPERFAMILY Nucleotide-diphospho-sugar transferases 612 805 IPR029044 -
Aip03g00335 948 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 615 863 IPR029044 -
Aip03g00335 948 SUPERFAMILY Nucleotide-diphospho-sugar transferases 191 391 IPR029044 -
Aip03g00335 948 CDD Glyco_tranf_GTA_type 204 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00335 Aip-Chr3 3263160 3268074 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00335 - - gmx:100790938 1652.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00335 03 3263160 3268074 Aip03g00335 03 3263160 3268074 ECH