Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00334 ATGATGAAGAGAGAAGAAAAAGAAGAACAAGAACAACAACTAGAAGAAGAAGAAGAAGAAGAAGAATCATCAAGGTTCAAGAGGGTATGTGTGTTTTGTGGTAGTAGCCCTGGGAACAAGAGTAGCTATAAGGATGCTGCTATTGACCTTGGCAAAGAACTGGTGTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGATTGATTTCTCAGGCTGTTTATGATGGAGGTCGCCATATTACTGGAGAGACAGTGGGGGAAGTAAAAGCAGTGGCAGGCATGCATCAAAGAAAGGCAGAGATGGCTAAGCATTCTGATGCCTTCATTGCTTTACCAGGTGGCTATGGAACTCTTGAGGAGCTTCTTGAGGTCATAACCTGGGCTCAGCTTGGAATCCATGACAAACCAGTGGGGTTGCTGAATGTAGATGGATACTACAATTCGTTATTGTCTTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCCAAAGCTCGCCACATAATCGTATCTGCCCCTTCACCAAAAGAGCTTGTCAAAAAGATGGAGGAATATTCCCCACAACATGAAAGAGTTGCATCTAAGTTAAGCTGGGAAGCTGAGCAAGTAGGATCATACACCTCAAATTGTGACATCTCAAGGTGA 663 0.4329 MMKREEKEEQEQQLEEEEEEEESSRFKRVCVFCGSSPGNKSSYKDAAIDLGKELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHITGETVGEVKAVAGMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSPKELVKKMEEYSPQHERVASKLSWEAEQVGSYTSNCDISR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00334 220 Gene3D - 25 207 - -
Aip03g00334 220 SUPERFAMILY MCP/YpsA-like 25 191 - -
Aip03g00334 220 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g00334 220 Pfam Possible lysine decarboxylase 70 188 IPR031100 -
Aip03g00334 220 PANTHER LOG FAMILY PROTEIN YJL055W 17 220 - -
Aip03g00334 220 TIGRFAM TIGR00730: TIGR00730 family protein 27 191 IPR005269 GO:0009691|GO:0016787
Aip03g00334 220 Coils Coil 1 27 - -
Aip03g00334 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 17 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00334 Aip-Chr3 3229826 3245616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00334 K22522 - gmx:100819644 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00334 03 3229826 3245616 Aip03g00334 03 3229826 3245616 ECH
Aip08g00532 08 4332014 4342082 Aip03g00334 03 3229826 3245616 ECH
Aip08g00532 08 4332014 4342082 Aip03g00334 03 3229826 3245616 PCT