Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00321 ATGTCCCACCTTCACCAGCATCCACAACACCCTCTTCTTCTTCAACAACACTACCACCACCCTGAAAGCTCCCTCTCATCTTTTCATGCAATAAACAAAGCCAAGAAGAAGAAGAAGAATGGTATTAGAAGAAGTGATGGGACTTTCTTGGGTCACAAGTTTGTGTCATCATCAATAACCTCCTTTTCTAACCATAATAATAAAAATAATAGTAATGAAGGTGATGAAGGAAGCCCTCCAACAACAACACAACAGTGTTGTTTTAATGTCTATTCTTCAAGGCGTTGGGGTGCTAATACTAACATTGTTGGGTGTAGTGAGGTTTCTTCTTCCATGGCCAGCCAACTAGAACCACCTTCTTCTTCTTTGCTTCGCTCTCCCTCCAATGATATTATTAGGAAGAAGAAAATTTCTGGGCAGCAAAAGAAAGAGGAACTTGAAAGAGAGATGAAAGAACTTTTAGCAGAGTTAGTAATGGTTGAGGGAGAGATATCAAGACTTGAAATCCAAATAAATCATCTTCAAACAAGTTTGAAACATGAACAAGAGATCACAAAGGAAACAAAATCAAAATCATGGAATTTGAGCAATAATAATAATTCTGGTTCTTATAATGTGAACAATCATCATCATCACAATTTCCCTACTTCTGCACCAATTCCAATTCCAATTCCAAGTCCTATTCATCATAGAAGCAGTGTTCATGAAAGAATGGCATATGAGACCAAAGCACTGCATTTCATAAGCAAAGCTATAAAGGGTGATTACTATGCTCTTAATAGTAATAATAATGAGCTTAGTAGTAGTCTTAATGAGAAAACAGGGTTCATGATGATGATGAAGAATTCAGTTGAACAGAAAGAAAACAAGTTTCAAGAGGATGTGAAGTTTCATCAAGAAAGAGTTGTTGGTAGGAAAATTAATAATGGGATGGTGAAAGCTCCTTCACCTATGAGAGACCCTCGCCATCCATCACCTAAGCTTAGGGAACGTAATCCAGAGATGTACCTAGATCTTCCAACAAGATCACTGCTTGATCCACTTCTTTCAGAAGAAAATGATCTAAAATGGCAACCCAACAAGCTATCAGAGAGCATAATGAAGTGTTTGAATTTCATATATGTGAGGCTTCTAAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGTCCAATTTTAAGGTCTATGCACTCTTCACTAAGCTCAAGAAGCTTTAGGGTGGACACTACATCAAACACAAAATCAAACTTAATGCTTCAAAGGGAAGCAAGGCAACAAGACCCTTATGCTATCTTTGATACTGAAGAGTCCATTCCAAGGGACATTGGTCCTTACAAGAACTTGGTTATATTCACTTCTTCTTCTATGGATCCTAAGTTCATCTCAAATCCTTCCTCTATTCCATTACTAAGGAAATTAAGGATCTTGATGAGTAATCTTCAAACAGTTGATTTGAAATGCCTTACTTATCAACAGAAGTTAGCATTCTGGATTAATGTGTACAATGCTTGTATCATGCATGCAACTCTCAATATAGGAGGCAACATAATAAATGCTCAAGAAATAGAGCATTTCATTTTGAGGAAAAGAGCTACTTCTAATATCAAAGAGGTACAGAGGAAGGGTGAGTGGGAAGATAAAGAGTCAAAAATTGGTGAACTTTATGAAGTTGAATCCATAGATCCTAATGTCACATTTGCTCTCTGTTGTGGAACTCGTTCTTCTCCAGCTGTGAGGATATACACATCTGAAGGAGTTACATCTGAATTGGAGAAATCAAAACTAGATTATCTTCAAGCTTCAATTTTGGCAACAAGCACAAAAAGGATTGGATTCCCAGAACTACTTCTCAGAAACATGCATGATTTTGCATCAGACATAGATTCATTGGTGGATTGGGTGTGTAACCAGTTACCTACTTCTGGTACTTTAAGGAAATCAATGGTGGATTGCTTCAGAACCAATAATAATAATAATAATAATGTTAAGGCTTCTACAATTGTTGACAAGATTCCCTATGACTATGAATTCCAATATCTGTTGACAATATAA 2052 0.3674 MSHLHQHPQHPLLLQQHYHHPESSLSSFHAINKAKKKKKNGIRRSDGTFLGHKFVSSSITSFSNHNNKNNSNEGDEGSPPTTTQQCCFNVYSSRRWGANTNIVGCSEVSSSMASQLEPPSSSLLRSPSNDIIRKKKISGQQKKEELEREMKELLAELVMVEGEISRLEIQINHLQTSLKHEQEITKETKSKSWNLSNNNNSGSYNVNNHHHHNFPTSAPIPIPIPSPIHHRSSVHERMAYETKALHFISKAIKGDYYALNSNNNELSSSLNEKTGFMMMMKNSVEQKENKFQEDVKFHQERVVGRKINNGMVKAPSPMRDPRHPSPKLRERNPEMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPILRSMHSSLSSRSFRVDTTSNTKSNLMLQREARQQDPYAIFDTEESIPRDIGPYKNLVIFTSSSMDPKFISNPSSIPLLRKLRILMSNLQTVDLKCLTYQQKLAFWINVYNACIMHATLNIGGNIINAQEIEHFILRKRATSNIKEVQRKGEWEDKESKIGELYEVESIDPNVTFALCCGTRSSPAVRIYTSEGVTSELEKSKLDYLQASILATSTKRIGFPELLLRNMHDFASDIDSLVDWVCNQLPTSGTLRKSMVDCFRTNNNNNNNVKASTIVDKIPYDYEFQYLLTI 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00321 683 MobiDBLite consensus disorder prediction 310 330 - -
Aip03g00321 683 PANTHER TRANSPORTER, PUTATIVE-RELATED 144 683 - -
Aip03g00321 683 Coils Coil 281 301 - -
Aip03g00321 683 Coils Coil 129 184 - -
Aip03g00321 683 Pfam Protein of unknown function, DUF547 487 598 IPR006869 -
Aip03g00321 683 MobiDBLite consensus disorder prediction 61 82 - -
Aip03g00321 683 PANTHER EXPRESSED PROTEIN 144 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00321 Aip-Chr3 3060740 3068693 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00321 - - ahf:112736472 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00321 03 3060740 3068693 Aip03g00321 03 3060740 3068693 ECH