Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00316 ATGTGCGAAACTCCGAAGATATTGTACATAGTGGTGGTGGACGAGAAGGAGAAGGATTCGTTTCGATACACGCGCTCTGTTCTTCAGAGCACTCTTCAACTTATGGGATGCAAAGCTCGCCATGCCTTCAAGATCAGCAAAAGAGTATTTGAAGTCACAAAGGGGGAGAGTACCACTGGTACCCCACAGCCTGAAGCTGTAACGCTGTCAGGTTCATACACACCAAGTGAAAATTTTGTGAATAAAGATGGTAAGAATGCTGGTTTTTGCTTGGCTAAAACAGACTTAGGAGACCGGTTATGTCGTCTGGCGAAAGAAAAAAATAACAGTGTACCATTTGAGTCGTACAAAAGGCGCACAACAGCATTTGTTCAGAGAGAAACATTTTTAGATATGGTTTGTGATGCTATGTCTGAGTACAAGTATCTCGGTCCCAATCAGAGAGCAGATTTGGTGCTAGCCTGCAGGATGCGAGAAAGGAAGGAGTCTGTGACAGTGCTGTTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTGTCTTCACTGCTGGGTGGCAGATTGGGCCTCACCACAGTGGTATCAACCGATTCTATCAGGCACATGATGAGGAGTTTTGCTGATGAGAAGGAGAACCCCTTGTTATGGGCTTCTACTTACCATGCCGGCGAGTGTTTGGATCCAGTTTCTGTTGCAGAAGCCAAGGCCAAAAAGAAAGCTAAAAAGCTAGCAGGCGTGGCACGTTCTCTTCCCAAGGATGTAGCAAACGAGGGTGGTCATAGGAAATGCGATTCAGGGACATTGGAGATAGGCTCTAACATTACTGAACTGCCAAATCCAAAGCAAATGGCTGTTGAAGGATTTAAGGCACAGAGCGAGATGGTGATTGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAACGGAAGGAGTCTGTTGTTGTAGAGGGTGTTCATTTGAGCCTAAACTTTGTTATGGGGCTTATGAAGAAACATCCTTCAATCATACCGTTCATGATATACATTTCAAACGAGGAAAAGCACCTGGAAAGATTTGCTGTACGTGCGAAGTATATGACACTTGACCCAGCTAAAAACAAGTATGTAAAGTATATTCGAAATATTAGGACAATTCAGGATTATCTCTGTAAGCGTGCTGAGAAGCATTTAGTTCCCAAAATAAACAATACAAATGTTGACAAGAGTGTAGCAGCCATCCATGCAACTGTCTTCAGCTGTCTTCGGAGGCGTGGAGCAGGGGATCAACTGTATGATCCCATTAGAAATACTGTAACGGTTGTTGATGAGGAGTATAGACATCAATGTGCAGCAAATACTTTAAGCTCGAAAGGAATGTTCCGGTTGATCCAGAGGAAAGGTTCTTCAAGGAGTCTGATGGCACTTGTTAATACCGATGGATCTGTTGCGAAAGCTTGGCCTGTTAATCGCGTTGACTCTAATGGGAAGCCTATTTGGGGCCTTGGACCAGATAATGGAATCGGAAGTCCAATGTATGGTCCCTTGCGGATTGGTAAGGCAGAACCGATAAATCTTCAGTTTGGTTTTTATGGGATCAGTGCTTGGCCCAGTGATGGTGGTACTAGTCGAGCTGGAAGTGTTGATGAGTCGAGGGCTGATGATTCTGGTAGTAGATATGATTCTGGTAGTAGATATTTATCCTCTTGCTGTAGCTCACCGACCTCGGAAGGTCCTGCGAAAGAGCTCAAGGAAGATTTCTCGGTGCATGGTAGTGATGAAGAGTTAGACGACGATGATCAGCTAGAGGTAGGTAGTGATGATGATTTAAGTGATGATGGTCACAAAGACGTCCATGACGAGGAAGGGTCAGTTGATGAGGAATCTACAAAGTCAGATGAGGAGTACGATGATCTTGCAATGCAAGATCAAGATTATGGGTATGTGTGGCAGGATGACGAGGAGGAGTTGAAGGATAAGCTTGCCGCGGTTGCAGCGGAGTTAGAAACAAAAATGCAACCGAATAATCATAATCGGAACATGGATGTATTCCATAGAACTAGAAGTGAGCCAATCCCTGTGCCAGGTCCAGGTCCAGGTCCAGACCATCGTTCTTACTCTTCCTTTCTCGTGGAAAAGAAGAGTGAAAGGAAAATAACGCCGAGGGGCAAAGCCAAAATGAGAAAACGCTCTCTTAGTATTCCTGCATTTGGCAAGCATAGTTCAGCAATCAATGATCCTATCCTTTCTGGTGCTCCCCAAAGGTAG 2241 0.4494 MCETPKILYIVVVDEKEKDSFRYTRSVLQSTLQLMGCKARHAFKISKRVFEVTKGESTTGTPQPEAVTLSGSYTPSENFVNKDGKNAGFCLAKTDLGDRLCRLAKEKNNSVPFESYKRRTTAFVQRETFLDMVCDAMSEYKYLGPNQRADLVLACRMRERKESVTVLLCGTSGCGKSTLSSLLGGRLGLTTVVSTDSIRHMMRSFADEKENPLLWASTYHAGECLDPVSVAEAKAKKKAKKLAGVARSLPKDVANEGGHRKCDSGTLEIGSNITELPNPKQMAVEGFKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYISNEEKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFSCLRRRGAGDQLYDPIRNTVTVVDEEYRHQCAANTLSSKGMFRLIQRKGSSRSLMALVNTDGSVAKAWPVNRVDSNGKPIWGLGPDNGIGSPMYGPLRIGKAEPINLQFGFYGISAWPSDGGTSRAGSVDESRADDSGSRYDSGSRYLSSCCSSPTSEGPAKELKEDFSVHGSDEELDDDDQLEVGSDDDLSDDGHKDVHDEEGSVDEESTKSDEEYDDLAMQDQDYGYVWQDDEEELKDKLAAVAAELETKMQPNNHNRNMDVFHRTRSEPIPVPGPGPGPDHRSYSSFLVEKKSERKITPRGKAKMRKRSLSIPAFGKHSSAINDPILSGAPQR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00316 746 Coils Coil 642 662 - -
Aip03g00316 746 MobiDBLite consensus disorder prediction 583 598 - -
Aip03g00316 746 MobiDBLite consensus disorder prediction 678 746 - -
Aip03g00316 746 MobiDBLite consensus disorder prediction 530 631 - -
Aip03g00316 746 MobiDBLite consensus disorder prediction 552 567 - -
Aip03g00316 746 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 1 742 - -
Aip03g00316 746 MobiDBLite consensus disorder prediction 599 617 - -
Aip03g00316 746 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 2 1 742 - -
Aip03g00316 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 415 IPR027417 -
Aip03g00316 746 Gene3D - 165 408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00316 Aip-Chr3 3018893 3022899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00316 - - cam:101503547 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00316 03 3018893 3022899 Aip03g00316 03 3018893 3022899 ECH