Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00292 ATGGAGAAGGTAATGAACATTCTGAAGCCGAAGCCGAACCCTCAACAGTTGTTGAGAGATTGGCAGCGTCGCCTTCGCCAGGAGTGCCGCAACATTGAGCGCCAAATTCGAGATATACAGAGAGAAGAGAAGAATGTACAAAAGGCGATTAAAGAAGCTGCAAAGAGGAACGATATGGGCTCTGCAAAGGCCCTTGCCAAGGAACTTGTGAGATCTAAGAAAACAGTAAACAGACTTTATGAAAATAAGGCACAATTGAATTCAATATCAATGCACCTTGGAGAGAGTGTGGCAATTGCTCGTACTGTGGGACATCTATCCAAGAGTGCTGAGGTTATGAAGCTTGTCAATAACCTCATGAAGGCTCCTGAAATGGCTGTGACAATGCAGGAGTTTAGCAAAGAAATGACAAAGGCAGGAGTAATCGAGGAGATAGTAAACGATGCTGTTGACTCAGCTCTAGATTCTGAGGACATAGAAGATGAGATCGAAGAAGAAGTCGACAAGGTACTGACAGCAATAGCTGGAGAGACAGCTGCAGAGCTTCCGGAAGCCGTTAGGAAACAAAAGTTGAAACAACCTGAACAAAGGGTTGGAACCAGTGAAGGGGTATGTACAAGTTCATTCTCTTTGTAA 636 0.4434 MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDMGSAKALAKELVRSKKTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETAAELPEAVRKQKLKQPEQRVGTSEGVCTSSFSL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00292 211 Coils Coil 18 56 - -
Aip03g00292 211 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 203 IPR005024 GO:0007034
Aip03g00292 211 MobiDBLite consensus disorder prediction 184 211 - -
Aip03g00292 211 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 3 203 - -
Aip03g00292 211 Gene3D - 9 185 - -
Aip03g00292 211 Pfam Snf7 21 187 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00292 Aip-Chr3 2843559 2845494 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00292 K12193 - gmx:100797244 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00292 03 2843559 2845494 Aip03g00292 03 2843559 2845494 ECH