Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00287 ATGGCGAAGAAATCTTCCATTGGAATCGGTACTTTGATGCGTAAGAAGCTTTCTGATATCACTAACAACTCTGACTCTCAACACAATCTACTTCCTCTAGCATTTCCCGCCATCGACGCCGATATCCCTTCCATTCAACAACTCCTCACTGAAAGAACGCAGTTAATACAACTCATTGCAGAGAAAGACGAATTGATAGAATCTAACGGAGCTGAGTTGAGAAGAATGCAAGCCGATATCAAGAAACTCCAACTCCAAAATCGGAACCTTGCTCAGTCTAACAGCTTAATGTTAGCGGAGCTTAATTTGGGAAGGGATAAGAGAAAATTATTGCAACATGAGATTTCATGCAGATCTGCTTTAATCAAAGCAAATGCCCTAAAAGCTGGTAGTAACGATGAAGGAAGACGCAAAAGAAGTAGATCTATTGGTTCTGACAAGGTTAAAGACAATAATAGAAGACGATCGAGGAGACATTCGGCTTTCGTGGAAACACATGAACACGAAGCTTCAGAGAATTTGTTTGAGATAGAGGATACNNAGGAGAAAAATCAAAGTTAA 561 0.3993 MAKKSSIGIGTLMRKKLSDITNNSDSQHNLLPLAFPAIDADIPSIQQLLTERTQLIQLIAEKDELIESNGAELRRMQADIKKLQLQNRNLAQSNSLMLAELNLGRDKRKLLQHEISCRSALIKANALKAGSNDEGRRKRSRSIGSDKVKDNNRRRSRRHSAFVETHEHEASENLFEIEDXXEKNQS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00287 186 MobiDBLite consensus disorder prediction 132 186 - -
Aip03g00287 186 PANTHER SHUGOSHIN 2 135 180 IPR044693 GO:0000775|GO:0034090|GO:0045144
Aip03g00287 186 PANTHER SHUGOSHIN 1 139 - -
Aip03g00287 186 PANTHER SHUGOSHIN 135 180 - -
Aip03g00287 186 PANTHER SHUGOSHIN 2 1 139 IPR044693 GO:0000775|GO:0034090|GO:0045144
Aip03g00287 186 Coils Coil 66 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00287 Aip-Chr3 2807645 2809040 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00287 - - aip:107629270 344.354