Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00277 ATGGCACTGCGACACTCTTCTTCAACCTTTTCAACCACGCTAACACTCTCTTCACCGAGAACCAAACCCCCAAAACCTTTTCCGCTTTTCTCCTTCACAAAGTTCCCATTTTTAACCGCACCAAACTCCATTTCCATCACACGGAGAACCAGAACAACCCTCTCTCTAACAGTTCCACGTGTTGCTGCGCCACCAACAAAGGTTGAAACCGAAGAAAGCAACGAAATTGATGAAGGTGCCGATGAAGAGAGCTCGTCCACGAAGTTCACATGGAAGGATCACTGGTACCCAGTTTCTCTGGTGGAGGATCTGAACCCTCGGTACCCAACGCCCTTTCAGCTTCTGGGTCGTGAGATCGTGGTTTGGTTCGATAATTCTAAGTCCCAGTGGGTTGCTTTTGACGATAAGTGCCCCCATCGTCTCGCTCCTTTATCTGAAGGAAGGATTGATGAAGGAGGGAACTTGCAATGTTCCTATCATGGTTGGTCTTTTGATGGATGTGGATCATGTGTTAGGATCCCTCAAGCTTCCTCCGAAGGACCGGAAGCGAGAGCTTTGAAATCTCCTAAAGCGTGTGTCACAAGGTTCCCTACAATGGTGTCTCAGGGTTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCTAATGCTTCCAATCCTCCAATGTTGCCGGATGACTTTGAGAAGCCGGAGTTTGCCACCGTGAACATTCAGCGTGATCTGTTCTATGGCTATGATACTCTAATGGAGAATGTCTCCGATCCTTCTCACATTGATTTTGCTCACCACAAGGTTACAGGCAGGAGAGACAGAGCCAAGCCTCTGCCATTCAAGATGGATTCTAGCGGACCATGGGGCTTCGCCGGAGCCAATGAAGGGAACCCAAGAATCAGTTCCAAGTTTGTTGCACCATGTTATTATATGAACAAAATTGAGATTGATACCAAACTTCCAGTAGTTGGTGACCAAAAATGGGTAATATGGATATGTTCCTTCAATGTCCCCATGGCACCCGGTAAGACTCGCTCCATTGTTTGCAGCGCTCGAAACTTCTTCCAGTTCACAGTGCCAGGGCCTAACTGGTGGCAGGTGGTTCCTAGATGGTACGAACACTGGACATCAAACAAGGTATATGATGGAGATATGATTGTCCTTCAAGGCCAGGAGAAAATCTTCCTTTCAGAAACCAAAGACGGTGGTGACATCAACAAACAGTACACAAACATCACCTTCACACCAACCCAGGCAGATCGCTTTGTCCTAGCATTCCGAAACTGGCTGCGGCGACACGGAAACGGCCAACCAGAATGGTTCGGGACAAGCAGCCAACAGCCATTACCATCAACCATCCTATCAAAACGCGAGATGATGGATAGATTTGAACAGCACACACTGAAGTGCTCTGCATGTAAAGGAGCTTATGAGGGATTCAAAACATGGCAGAAGGTCCTAATTGGTGCAACAGTTTTGTTCTGCGCATCAAGTGGAATCCCATCAGAGACTCATTTGAGAGTAATCTTGGCTGGGCTTGCAGTTCTCAGTGCAGGATTAACCTATGCCGTAACCGAACTCCAAAAGAACTTTGTATTCGTAGATTATATTCATGCCGATATAGATTAA 1626 0.4699 MALRHSSSTFSTTLTLSSPRTKPPKPFPLFSFTKFPFLTAPNSISITRRTRTTLSLTVPRVAAPPTKVETEESNEIDEGADEESSSTKFTWKDHWYPVSLVEDLNPRYPTPFQLLGREIVVWFDNSKSQWVAFDDKCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGCGSCVRIPQASSEGPEARALKSPKACVTRFPTMVSQGLLFVWPDENGWEKANASNPPMLPDDFEKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSSGPWGFAGANEGNPRISSKFVAPCYYMNKIEIDTKLPVVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPNWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSETKDGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGTSSQQPLPSTILSKREMMDRFEQHTLKCSACKGAYEGFKTWQKVLIGATVLFCASSGIPSETHLRVILAGLAVLSAGLTYAVTELQKNFVFVDYIHADID 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00277 541 MobiDBLite consensus disorder prediction 1 20 - -
Aip03g00277 541 SUPERFAMILY Bet v1-like 202 437 - -
Aip03g00277 541 MobiDBLite consensus disorder prediction 62 84 - -
Aip03g00277 541 Pfam Pheophorbide a oxygenase 303 398 IPR013626 GO:0010277
Aip03g00277 541 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 42 541 - -
Aip03g00277 541 Gene3D - 234 436 - -
Aip03g00277 541 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g00277 541 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 42 541 - -
Aip03g00277 541 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 95 207 IPR017941 GO:0051537
Aip03g00277 541 CDD Rieske_RO_Alpha_PaO 78 218 - -
Aip03g00277 541 SUPERFAMILY ISP domain 87 213 IPR036922 GO:0051537
Aip03g00277 541 Pfam Rieske [2Fe-2S] domain 94 177 IPR017941 GO:0051537
Aip03g00277 541 Gene3D - 90 233 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00277 Aip-Chr3 2718947 2723011 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00277 K13071 - gmx:778121 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00277 03 2718947 2723011 Aip03g00277 03 2718947 2723011 ECH