Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00268 ATGGCTAAGCTTCTTCTTCTCCTATTCTTTGCTCTTCTCTTTCATGGAGGAATTGGAATTAAGAGTAACCAAGATGGATCAGAGGAATGGGGCTATGTAGAAGTAAGACCAAAAGCTCACATGTTCTGGTGGCTTTACAAGAGTCCTTATAGAGGTGCTTCAGGAGTTGGAATTGGAAACTTTGAAGAGGTTGGTCCATTAGATACTGATTTGAAGCCAAGAAACTCAACATGGCTCAAAAAAGCAGATCTATTGTTTGTGGATAATCCGGTTGGAACAGGGTACAGTTTTGTGGAGGATAAGAGTTTGTTTGTGAAAACAGATGATGAAGCAGCGACAGATTTAACAACATTGTTAATTGAGTTATTTAACAGAAATGAGAGCCTCAAAAAGAGCCCTCTTTACATTGTGGCAGAATCATATGGTGGCAAATTTGCTGTGACGCTTGGATTATCCACCACTAAAGCCATTGAAGAAAAAAGACTCAACCTCACACTTGGAGGTGTGGCATTAGGTGATAGTTGGATCTCCCCAGAAGATTTTGTGTTCTCATGGGGCCCTCTGCTTAAAGACCTTTCACGCCTTGATGACAATGGGCTACAAAAATCTAACAGTGTGGCTGAGAAGATCAAGCAACAAATTGAGGAGGGTAAATTTGTTGATGCAACCAACTCATGGAGTGAACTTGAGTCTGTTATTAGCCAAAACAGTAACAGTGTGGATTTTTACAATTTCCTAGTGGATGCTGGAAGTGATTCAGTAGCGTTATCGTCAGCAATGGAGTTGGGGTTATTTAGGGAATTTTCTATGAATAGATACTCAAAATATCTGACTTCAATGAGGTTGAGTTCTTCCTCATCTTTATATCCCGGTGGTGGCAATGATCTTGACACTTTACTTAATGGGGTCATCAAGAAGAAATTGAAGATCATCCCCCAAAACGTTACGTGGGGAGGACAGTCTGATGGTGTTTTCACCAATCTTGAATCCGATTTCATGAAGCCAAGAATTAATGAGGTTGATCTGATTTGTGCAACCAAAGGGACCGAAGCTTGGGTTAGGAAACTCAAGTGGGAAGGGCTTCAAAATTTCTTGAATAAAGAGAGAACACCACTCTACTGTGGAAGTGACAAAACAACCAAAGGATTTGTTAAGTCATACAAAAACCTACACTTCTATTGGATCCTTGGAGCTGGCCATTTTGTGCCCACTGATCAGCCATGCGTGGCACTAGACATGGTGAGTGCAATTACACAGTCACCAGCAGCTTGA 1272 0.4119 MAKLLLLLFFALLFHGGIGIKSNQDGSEEWGYVEVRPKAHMFWWLYKSPYRGASGVGIGNFEEVGPLDTDLKPRNSTWLKKADLLFVDNPVGTGYSFVEDKSLFVKTDDEAATDLTTLLIELFNRNESLKKSPLYIVAESYGGKFAVTLGLSTTKAIEEKRLNLTLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLQKSNSVAEKIKQQIEEGKFVDATNSWSELESVISQNSNSVDFYNFLVDAGSDSVALSSAMELGLFREFSMNRYSKYLTSMRLSSSSSLYPGGGNDLDTLLNGVIKKKLKIIPQNVTWGGQSDGVFTNLESDFMKPRINEVDLICATKGTEAWVRKLKWEGLQNFLNKERTPLYCGSDKTTKGFVKSYKNLHFYWILGAGHFVPTDQPCVALDMVSAITQSPAA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00268 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 87 97 IPR001563 GO:0004185|GO:0006508
Aip03g00268 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 147 IPR001563 GO:0004185|GO:0006508
Aip03g00268 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 390 403 IPR001563 GO:0004185|GO:0006508
Aip03g00268 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 74 86 IPR001563 GO:0004185|GO:0006508
Aip03g00268 423 PANTHER CARBOXYPEPTIDASE 5 421 - -
Aip03g00268 423 Pfam Serine carboxypeptidase 23 418 IPR001563 GO:0004185|GO:0006508
Aip03g00268 423 ProSitePatterns Serine carboxypeptidases, serine active site. 136 143 IPR018202 GO:0004185
Aip03g00268 423 SUPERFAMILY alpha/beta-Hydrolases 27 420 IPR029058 -
Aip03g00268 423 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 421 IPR001563 GO:0004185|GO:0006508
Aip03g00268 423 Gene3D alpha/beta hydrolase 19 422 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00268 Aip-Chr3 2655998 2660711 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00268 K09646 - gmx:100808412 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00268 03 2655998 2660711 Aip03g00268 03 2655998 2660711 ECH