Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00267 ATGCAGCCGAATCTTTTCCCCTTTGCAAGCGTTCTCGGGAATCCGTTCACACTCAATACCAGTAGCTTCAACACTGGTAATGGCGAAGTAAGCGAGGGGATCGATAGCTCTAGGGTTTTCTTCTTGCTCCCTTTCTTCTTGCTCTCTCAGGGAGGAGGAGCTATGGATCTCTCTAAAGTCGGCGAAAAGATCTTGAGTTCCGTTAGGTCCGCTAGGTCTCTCGGCTTGATCCCTTCCGTCTCCGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGATTACCTCCTCATCAGAGGTATAGTCTTTCATCAAGTTCAGAAGAACTGAGTTCAATATATGGTAGCAGACCAAATAGCCAAGTGGTGGAGGAACTAGAGGATGAATTTTATGAGGAGGATTTTGACCCAATTAAGCATGTTCTAGAGCACACTCCAGCTGAAGATGACGAGCTTACATATTTAGAAAAACAGGCTGCCCTTAGATTAGCACAACTGGACAGAGTAGCAGAACGTTTATCTCGGCATGTTATGCAGCATCATGAAGTAATGGTGAAGGGGATGGATTTGGTCAGAGAATTAGAAAAAGACTTGAGAATTGCAAATGTCATATGCATGAATGGAAGAAGACATTTGACCTCATCTATGAATGAGGTTTCAAGGGATCTCATTGTGAATTCACATTCAAAAAAGAAACAAGCACTTCTGGACGTTCTTCCAATCTTGAGTGAGCTTCAACGTGCGTTGGACATGCAAGTGACACTTGAATCTCTTGCGGAAGAAGGAAATTACTGCAAAGCATTTCAAGTCCTCTCTGAGTATTTGCAACTCTTGGATAGTTTGTCAGAGCTTTCAGTAATACAAGAGATGAGCCGGGGTGTGGAGGTTTGGCTGGGAAAAACTTTACAGATGCTGGATGCTCTCTTATTGGGGGTATGTCAGCAATTCAAGGAAAATGGCTATATAACAGTAATAGATGCATATGCATTGATAGGGGATACTGCTGGTCTTGCTGAAAAGATACAGAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACACTGTATTGAAGGCTATTGTGCTTGAGGATGAGGAGGATGCTTCCCAAAATAGTAGGCTCACTTACAGCGACCTATGCCTTCAAATACCTGAGTCTAAATTTAGGCAATGCTTGTTAAGAACATTGGCTGTACTATTTGACATTATGCGTTCATACCATGAAATTATGGATTTTCAGCTGGAGAGAGAGGAGTCAGCAGCACAAACTTCAACTATGGCCCAGGAAGTTGATTCAGATGAAAGAAGCCGCAGCAATTGTGGGGAGGAACCTGCAACAAACAGTGAAGCTACTGGACCATCATACATTGATTCTCATGATCCCATAAATGAGGCTAGTAAGGAGGATATTGTGGCATCAAGCAGTGAATCCCCATGGTACCATCTTCGCAAAGAAGCTACAGCATTTGTTTCACAAACCCTTCAAAGAGGTCGCAAGAATTTGTGGCATCTCACTGCAAGTCGTATGTCAGTCTTACTTTCTTCTCCTGCAGCATGTTCTGCAAGTATTCACCAATTCTTGAGAAATTATGAAGATCTAAGTGTTTTCATTTTGGCTGGGGAAGCCTTTTGTGGAGTTGAAGCAGTTGAGTTCAGGCAGAAGTTGAAGGTCGTTTGTGAAAACTATTTCAACGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTTTTAGATAAAGAGACTTGGCTAAAATTACCCCCAGATACAGTGCAACTAGTCAGCTTTGCTGGACTTACTGGTGATGGTGCACCGCTAATTTCTTTATCTGGTGGTAAATCACTTAATTCCGGTGCAATCCAGTCTGACAAATCAATGAACATGGTTCACACCAGTGCTAGAAGGAGTGGGTTCTCTAATTGGGTTAAAGGTGGAAACCCTTTTTTGCATAAGTTATCAGCCTCTAGAGAAGGTCATGGTTATTCCCAATCTAATGGATCAATACATAGTGAACTTGAGGGAGGTTCAAATAACTTTAATGGTGATAAAGAGTCACCTGGAAAGAATGATTCCAACAAGATGAATGGTGGCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCGGACTTTATTGATGAAGACAGTCAATTGCCAAGTCGTCGTTCTAAACCCCATCGAAGAGTTCCCTCTTCTCATGGTAATGATGCAGATAATACTACACAAACTGGATCTTCTTTGTGTCTTTTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAGTTAGAAGTAATAAATGTTGAGTTCTTTAAGGGAATGTGCCAATTGTTTGAAATTTTTTTCTATTTTATATATGAAATATTTGGTCAGCAAAACACTAATTCAAGTGGAAAAAGCTCAAGCAACTCTCTCAACTATCGGTTGAAGACAGCCTTATCAAGAATAAGCCAAGATTGTGATGAGTGGATTAAGACCCACTCATCTTCACCATCATCTCTTGTACATGCAGAGTTGAAGCCTACGAGCCCTCCCAGCACAAATTTCAGTCACTCTTCGGCAACTTCTTTTGGTCTCCAGGAAAGATGTGTAGCTGTTGACACTATCTCTGTTGTTGCTCAAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTATTGCGAAGTAATTCAACTGTACTTGAAGATTTCTTTGTGCATCTGGTGGATGCTGTACCTGATCTTGTAGAGCATGTTAATCGGACAACAGTTAGATTATTGCTGCACATTAATGGGTATGTTGAGCGCGTCGCCAATGCTAAATGGGAGGTAAAAGAGCTTGGGATGGAGCATAATGGGTATGTTGATTTGTTGCTGGGTGAATTTAAGCATTTTAAAACACGACTTGCTCATGGAGGACTTCGGAAAGAGATTCAAGACCTATTATTGGATTATGGACTCGAAATCGTAGCAGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGACGAAGGAAGAGCTCTAATGTCATTGGATCTGCAGGTTTTGATCAATGGCTTACAGCATTTTGTGTCGTTTAATGTGAGGCCCAAGTTACAAATGGTTGAAACTTTCATTAAGGCTTATTACCTGCCAGAGACAGAATATGTACATTGGGCACGTGCACATCCAGAATACACTAAAAGCCAGATTGTTGGGTTGATCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACGAGGTTGGAAGTACTGGAAAAGATTGAATGA 3291 0.416 MQPNLFPFASVLGNPFTLNTSSFNTGNGEVSEGIDSSRVFFLLPFFLLSQGGGAMDLSKVGEKILSSVRSARSLGLIPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPNSQVVEELEDEFYEEDFDPIKHVLEHTPAEDDELTYLEKQAALRLAQLDRVAERLSRHVMQHHEVMVKGMDLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSHSKKKQALLDVLPILSELQRALDMQVTLESLAEEGNYCKAFQVLSEYLQLLDSLSELSVIQEMSRGVEVWLGKTLQMLDALLLGVCQQFKENGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHTVLKAIVLEDEEDASQNSRLTYSDLCLQIPESKFRQCLLRTLAVLFDIMRSYHEIMDFQLEREESAAQTSTMAQEVDSDERSRSNCGEEPATNSEATGPSYIDSHDPINEASKEDIVASSSESPWYHLRKEATAFVSQTLQRGRKNLWHLTASRMSVLLSSPAACSASIHQFLRNYEDLSVFILAGEAFCGVEAVEFRQKLKVVCENYFNAFHRQNVHALKMVLDKETWLKLPPDTVQLVSFAGLTGDGAPLISLSGGKSLNSGAIQSDKSMNMVHTSARRSGFSNWVKGGNPFLHKLSASREGHGYSQSNGSIHSELEGGSNNFNGDKESPGKNDSNKMNGGNSVSEDENEDLLADFIDEDSQLPSRRSKPHRRVPSSHGNDADNTTQTGSSLCLLRSMDKYARLMQKLEVINVEFFKGMCQLFEIFFYFIYEIFGQQNTNSSGKSSSNSLNYRLKTALSRISQDCDEWIKTHSSSPSSLVHAELKPTSPPSTNFSHSSATSFGLQERCVAVDTISVVAQILNRSKAHLQSMLLRSNSTVLEDFFVHLVDAVPDLVEHVNRTTVRLLLHINGYVERVANAKWEVKELGMEHNGYVDLLLGEFKHFKTRLAHGGLRKEIQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSFNVRPKLQMVETFIKAYYLPETEYVHWARAHPEYTKSQIVGLINLVATMKGWKRKTRLEVLEKIE 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00267 1096 MobiDBLite consensus disorder prediction 664 710 - -
Aip03g00267 1096 Pfam Vacuolar-sorting protein 54, of GARP complex 131 420 IPR019515 -
Aip03g00267 1096 MobiDBLite consensus disorder prediction 722 752 - -
Aip03g00267 1096 PANTHER UNCHARACTERIZED 27 1096 IPR040047 GO:0032456|GO:0042147|GO:1990745
Aip03g00267 1096 Pfam Protein of unknown function C-terminus (DUF2451) 866 1096 IPR019514 -
Aip03g00267 1096 MobiDBLite consensus disorder prediction 428 467 - -
Aip03g00267 1096 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 27 1096 - -
Aip03g00267 1096 MobiDBLite consensus disorder prediction 665 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00267 Aip-Chr3 2641107 2653679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00267 K23288 - gmx:100803274 1726.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00267 03 2641107 2653679 Aip03g00267 03 2641107 2653679 ECH