Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00262 ATGGGGTATTCAAGGAGTTCTATATTTCGTTCCTTTGTTGTTGTAGTTGTTGTTTTTGTTGTTTTGGTGGTGAATGTGGGGAATGGACAACTAGTTCCTGCATTGTTCATATTTGGGGACTCAGTTGTTGATGTTGGCAACAATAACCACCGATTAACTCTTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCCAAAATCACTATCCAACGGGAAGGTTCTGCAATGGAAAGCTGGCCACAGATTTCATTGTTGAGATTCTTGGATTTACCTCTTATCCACCAGCTTACATGGACTTAAAGCCTAGAGGAAAAAACCTCTTGAATGGAACTAACTTTGCCTCAGCTGCTTCTGGTTACTTAGATGCTACAGCCACACTATATAATGCTGTTCCATTGAGCCATCAGCTGGAATATTACAAGGATTGTCAGAACAAATTGGTGGAAACAGCAGGGCAATCAAAGGCTGCATCAATTATATCTGATGCTATATATATTGTTACCGCAGGCAGCAGTGACTTTATTCAAAACTTTTACATAAATCCTTTGCTAAACAAGGTTTATACAGCTGATAAATTCTCGGATCTTCTCTTGCAACGCTACTCCAATTTCATTCAGGCATGGTATGTGCATTTATCTAAAAGAATATTAATATTTAGTAATGAACAGAATTTGCATGCACTAGGAGCAAGGAGAATAGGTGTAACAACATTGCCTCCAATGGGTTGTTTGCCAGCATGCATAACTCTGTTTAATCCTCACAGCAACGAATGCGTGTCGAATTTCAACAATGATGCTATCAACTTCAATGCAAAGCTGAATGCAACTTCTCAGAAGTTGAGACAAATGCTTCCTGGACTCAACTTGGTCGTCCTTGATATCTATCAGCCTCTCTATGACCTTGTCACTAAGCCCCAAGACTATGGATTTTCTGAAGCAAGGAAAGGTTGTTGTGGAACGGGGCTGGTAGAAACAGCAATATTGTGCAACAAGAAGTCCATAGGAACATGTGCTAATGCAACTGAGTATGTATTCTGGGATGGTCTTCATCCCTCAGAGGCTGCAAACCAAGTTTTGGCCAATGATTTGTTAGCTGCTGGCATTTCTCTCATATCCTAA 1122 0.4029 MGYSRSSIFRSFVVVVVVFVVLVVNVGNGQLVPALFIFGDSVVDVGNNNHRLTLVKANFPPYGRDFQNHYPTGRFCNGKLATDFIVEILGFTSYPPAYMDLKPRGKNLLNGTNFASAASGYLDATATLYNAVPLSHQLEYYKDCQNKLVETAGQSKAASIISDAIYIVTAGSSDFIQNFYINPLLNKVYTADKFSDLLLQRYSNFIQAWYVHLSKRILIFSNEQNLHALGARRIGVTTLPPMGCLPACITLFNPHSNECVSNFNNDAINFNAKLNATSQKLRQMLPGLNLVVLDIYQPLYDLVTKPQDYGFSEARKGCCGTGLVETAILCNKKSIGTCANATEYVFWDGLHPSEAANQVLANDLLAAGISLIS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00262 373 CDD SGNH_plant_lipase_like 33 365 IPR035669 -
Aip03g00262 373 Gene3D SGNH hydrolase 26 369 IPR036514 -
Aip03g00262 373 PANTHER GDSL-MOTIF LIPASE 224 372 - -
Aip03g00262 373 PANTHER GDSL-MOTIF LIPASE 14 217 - -
Aip03g00262 373 Pfam GDSL-like Lipase/Acylhydrolase 35 363 IPR001087 GO:0016788
Aip03g00262 373 SUPERFAMILY SGNH hydrolase 230 366 - -
Aip03g00262 373 PANTHER GDSL ESTERASE/LIPASE EXL3 224 372 - -
Aip03g00262 373 PANTHER GDSL ESTERASE/LIPASE EXL3 14 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00262 Aip-Chr3 2607674 2609356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00262 31 364 Acyl Lipid Metabolism Gene Families AT4G10950 32.047 2.75e-60 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00262 - - gmx:100775618 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00262 03 2607674 2609356 Aip03g00262 03 2607674 2609356 ECH
Aip08g00592 08 5213467 5215676 Aip03g00262 03 2607674 2609356 PCT