Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00246 ATGGTTTTGGTTCTAACACCTTCTTCTTCTTCTTCCTCTGTTTGTCTTCTCCGTCGCAGTCCCCCAAGGTACGGCGCCGTTCGATGCTCCTCCAGCGTGCAGGAGATACAGAAGCCTCCCGGAGAAGGGCTCAGCTCGGATCTCCGGGCATCGGAGCCTTTGCCTCCGTTAAAGGTAGCGAAGAGGGTTGTTCTGGTGAGGCACGGGCAGAGCACGTGGAATGCAGAGGGGAGGATCCAAGGGAGCTCTAACTTCTCTGTGCTCACCAAAAAGGGCGAGTCTCAGGCGGAGACTTCCCGCCAGATGCTCATTGATGACAACTTCGACGCATGCTTTGCAAGTCCTTTGGAACGGTCCAAGAGAACAGCGGAGATCATTTGGGGAGGACGTAAAGAATCAATAATTCCCGAGTATGAATTGAGGGAGATTGACTTGTACTCATTTCAAGGTCTGTTGAAGAATGAGGGGAAAGAGAGATATGGTTCTGCTTATCGTCAATGGCAGCTGGATGCTGCGAATTTCATCATCGATGGTCATTATCCGGTGAGAGAGCTATGGGAACGTGCTAGGAACTGCTGGACTAAAATCTTAGCACATGATAGCAGGTCCGTTCTTGTGGTTGCTCACAATGCCGTTAATCAGGCTCTTGTTGCTACAGCAATTGGTTTAGGGGTGGAGTATTTTAGATGTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTGGATTTCATTCCCAGGCCTGAGGGCGGATCTCCGGACATTTGCCTCGATCGCTTAAATCAGACCCCTGGTTCACCAGTGGCTGGTGGAAAATCTGGAGGCAGAGATACAAATAAGCGGATCATACTTGTTTGTAATGGATCTACGCAGGGAAATACGGAGAATAGTTTTCCCTTTGCTGGTGATCAACCAATGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAGTTCCATAATTAGCAGTCCTAACAAGGCTTGTTTTGAGACTGCCATGACCATCTCCAAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCACGCTATGTTGAGTTGAAGCAAATCGGTAACCTAGATGTTGAAACAATCTTTCAGCAATCCAAAATGGATTTATCCAATTTTCCCCCAATTCAGCCTGGATGGTTAAATAGGATTGATGATGGGTTGAGAACAACATTATGGGATCAATCTGGAAAGGCATGGCAATCCTTGTTGGATGAAATATCCGATGAATCGAGCGAAGGAGTCTTGGTAGCGGTTGCTCATCCAGCAATCCACATAGCACTAATGGGGCACTGCCTTAACTTGACCAAGGAATGGTTAGGGTCATTTCATCTAGACGAAGGGAGTGTTAGTGTCCTTGACTTCCCTGATGGCCCTAAAGGAAGAGGTGTCATAAGGTGCATAAATTATACTGCACATTTGGGGAGATGGTCCATCCCTATTACAAGATCAACAGAAGATGGTGAAGAGTTTTAA 1515 0.47 MVLVLTPSSSSSSVCLLRRSPPRYGAVRCSSSVQEIQKPPGEGLSSDLRASEPLPPLKVAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDNFDACFASPLERSKRTAEIIWGGRKESIIPEYELREIDLYSFQGLLKNEGKERYGSAYRQWQLDAANFIIDGHYPVRELWERARNCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGVEYFRCLLQSNCGVSVLDFIPRPEGGSPDICLDRLNQTPGSPVAGGKSGGRDTNKRIILVCNGSTQGNTENSFPFAGDQPMNMLGVIQSQKSAELLLDLKVSSIISSPNKACFETAMTISKVQEAADCLGADCVPRYVELKQIGNLDVETIFQQSKMDLSNFPPIQPGWLNRIDDGLRTTLWDQSGKAWQSLLDEISDESSEGVLVAVAHPAIHIALMGHCLNLTKEWLGSFHLDEGSVSVLDFPDGPKGRGVIRCINYTAHLGRWSIPITRSTEDGEEF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00246 504 CDD HP_PGM_like 62 243 IPR013078 -
Aip03g00246 504 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 22 246 - -
Aip03g00246 504 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 423 504 - -
Aip03g00246 504 Pfam Histidine phosphatase superfamily (branch 1) 63 244 IPR013078 -
Aip03g00246 504 Pfam Histidine phosphatase superfamily (branch 1) 281 471 IPR013078 -
Aip03g00246 504 SUPERFAMILY Phosphoglycerate mutase-like 61 247 IPR029033 -
Aip03g00246 504 Gene3D - 273 491 IPR029033 -
Aip03g00246 504 MobiDBLite consensus disorder prediction 31 50 - -
Aip03g00246 504 SUPERFAMILY Phosphoglycerate mutase-like 279 492 IPR029033 -
Aip03g00246 504 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 65 74 IPR001345 GO:0003824
Aip03g00246 504 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 423 504 - -
Aip03g00246 504 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 22 246 - -
Aip03g00246 504 Gene3D - 61 247 IPR029033 -
Aip03g00246 504 CDD HP_PGM_like 280 479 IPR013078 -
Aip03g00246 504 SMART PGAM_5 62 216 IPR013078 -
Aip03g00246 504 SMART PGAM_5 280 441 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00246 Aip-Chr3 2429150 2432199 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00246 K22200 - gmx:100794084 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00246 03 2429150 2432199 Aip03g00246 03 2429150 2432199 ECH