Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00245 ATGAGGGACATAGTATCTTGTTTCAGTGAAAACGCAGTGAATGTGTCTAATTACACTTCATGTTCTTCAAGCTACGCATCAATCAACAACCCTTGCATCATTAACCAAACAACACTTTCTTCTTCATCACCTTCAATCCAAAACTCAGTTTCCAGTGTCTACAAATTGGTCCTCTCCACCTTGAAGCAGCTCTTGTTCACTGTCACATGGTGCAGAAGCCACTCCAACCAAGGACTCACCATAAGCTTCGGTAGTAATGAGGTTCATGACCCTTCATCAGCACCACCAACGTTTAGGCTCAACACAAATTCAAGGTTCTTTAGGAAGAAGAAAGGAAGCAAATTGATTGAGTTATGTGATGAATCATCATCGAAGATTGAAGTGTTTTGGGACCTGTCAAATGCAAGATATGAATCTGGGCCTGAACCAGTTGAAGGTTTCTATTTGGTGATCGTTGTTGACTCAGAAGTAGGCCTAGTCCTCGGCGGCGACGCGGCGGAGGAATTCACCTCAAAAAAGCTCAAATCGAACTCCATGGTAACGAAAACATCGCTGCTATCAAGGAGAGAGCATTGTTCAGGGACAACACAGTACACAACAAAGGCTCAATTCTGTGAAACTGGAACATTTCATGATGTGTTGATAAGGTGCACCATGGAGAATGAAGAAGGGGTGCACAGTAAGAATCACCACCACCACCATCCTCACCCTCACCCTGTTCTCTCTGTTTGCATTGATAAGAAGACAGTGATCCGCGTGAAGAGGCTTCAGTGGAATTTCAGAGGAAACCAAACAATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAATCCGAATGCAAATGCAGGTTCTGGTTATGCAGTGTTTATGTTCAGAACAAGAAGTGGCTTAGATAGCAGGTTGTGGTTAGAAGAGAAGACACCACACAAAGATAAAGACAGAATTGAATTCTCCTTGTTGATCTATGCCTGTAAGACCTCATAA 1008 0.4296 MRDIVSCFSENAVNVSNYTSCSSSYASINNPCIINQTTLSSSSPSIQNSVSSVYKLVLSTLKQLLFTVTWCRSHSNQGLTISFGSNEVHDPSSAPPTFRLNTNSRFFRKKKGSKLIELCDESSSKIEVFWDLSNARYESGPEPVEGFYLVIVVDSEVGLVLGGDAAEEFTSKKLKSNSMVTKTSLLSRREHCSGTTQYTTKAQFCETGTFHDVLIRCTMENEEGVHSKNHHHHHPHPHPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPNANAGSGYAVFMFRTRSGLDSRLWLEEKTPHKDKDRIEFSLLIYACKTS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00245 335 PANTHER DUF868 FAMILY PROTEIN 1 334 - -
Aip03g00245 335 PANTHER EXPRESSED PROTEIN 1 334 IPR008586 -
Aip03g00245 335 Pfam Plant protein of unknown function (DUF868) 46 333 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00245 Aip-Chr3 2417597 2419523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00245 1 334 EF-hand Containing Proteins AT5G28150 33.929 7.03e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00245 - - lang:109353379 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00245 03 2417597 2419523 Aip03g00245 03 2417597 2419523 ECH
Aip08g00617 08 5585351 5587087 Aip03g00245 03 2417597 2419523 PCT