Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00241 ATGGCATCAACACCAAAACAGTCTTATGAACAGCAGCCACTGAATGCGCAGCAGCGAGCTAGGAACTCGGGGATGATCAACTCTAGCCAGAGTCCAACAGGGGATGAGAGGGAAGAGGAGATGTCGAGATCAGCCTTGGCGATGTTTCGAGCCAAGGAAGAAGAGATTGAAAGGAAGAAAATGGAGGTGAGGGATAAGGTTCATACTTATCTGGGAAAAGTTGAAGAAGAAACAAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAGTCTCTCACAGATCCATTGAGGAAAGATGTTGCAGTAATTCGCAAGAGGATAGACATTATTAACAAAGAGTTAAAGCCACTGGGTCAGACCTGCCAAAAAAAGGAGAGAGAATACAAGGATGCCCTTGAAGCTTTCAATGAGAAAAACAGAGAAAAGACTCAACTAGTTACAAAATTGATGGAGCTGGTGACTGAAAGTGAGAAGTTGAGGATGAAGAAGCTTGAAGAGCTAAGCAAAAACGTAGATAGCCTCCATTGA 525 0.4381 MASTPKQSYEQQPLNAQQRARNSGMINSSQSPTGDEREEEMSRSALAMFRAKEEEIERKKMEVRDKVHTYLGKVEEETKRLAEIREELESLTDPLRKDVAVIRKRIDIINKELKPLGQTCQKKEREYKDALEAFNEKNREKTQLVTKLMELVTESEKLRMKKLEELSKNVDSLH 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00241 174 Coils Coil 71 91 - -
Aip03g00241 174 PANTHER - 11 173 - -
Aip03g00241 174 MobiDBLite consensus disorder prediction 1 46 - -
Aip03g00241 174 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 173 IPR007033 -
Aip03g00241 174 Coils Coil 120 140 - -
Aip03g00241 174 MobiDBLite consensus disorder prediction 1 32 - -
Aip03g00241 174 Pfam Transcriptional activator 21 172 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00241 Aip-Chr3 2401319 2403348 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00241 - - gmx:100499699 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00241 03 2401319 2403348 Aip03g00241 03 2401319 2403348 ECH
Aip06g01971 06 82681995 82683188 Aip03g00241 03 2401319 2403348 ECH