Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00234 ATGGAAATAGGAAGCATAACTGAGTTCCTTAAGGATAAGAATGTTTTGGTCATTGGTGCCACGGGCTTCCTTGCAAAAATTTTTATAGAGAAGATACTGCGAGTCCAACCCAATGTGAAGAAACTGTATCTTCTTTTGAGAGCCAAAGATGCTGAATCTGCCACTCGCCGATTGCACAATGAGATTTTAGGGAAGGAATTGTTCAGATTATTGAAGGAAAAAGTGGGTGCAAAGTTCAATTCCTTTGTCTCAGAAAAGTTGACTCTTGTTCCTGGAGATATCTCTTATGAAGACTTTAATTTGAAGGACTCCATTCTACGCCAAGAGCTTTACAATGAACTTGATGTTATAGTTAACTTAGCTGCAACAACTAACTTCGACGAAAGATACGATGTTGCATTGGGTTTAAATACATTTGGAGTGAAGCATGTATTAAGCTTTGCCAAAAACTGCACTAAACTGAAGGTGCTTGTCCATGTATCAACAGCATATGTATGTGGGGAGAGAGGAGGAGTGATAGTAGAGGATCCACACAAAATGGGTGTTTCACTGAATGGAGTGCAAGGACTCAACATTGTTGAGGAAAAGAAGATTGTGGAGAAGAAGCTGAAGCAACTTCAACAGGATGGAGCCACAGAGGAAGAAATCAAAATCTCCATGAAGGACTTGGGCATGGAAAGAGCAAATGAATATGGATGGCCAAACACATATGTGTTTACAAAAGCAATGGGAGAAATGCTAGTTGAAACTTTAAAAGAAGATATGCCAGTTGTTATTCTACGTCCTACAATCGTTACTAGCACCTACAAAGAACCATTTCCTGGTTGGGTGGAAGGCGTAAGAACCATCGATAGTTTAATTGTTGCGTATGGTAAAGGAAAATTAACATGCTTCCTTGCGGACCTTAAGAAGGTGTTTGATGTGATACCAGCAGACATGGTAGTGAATGCAATCCTTGCAGCGATGGTGGGTCATGGGAGCAATAATGAAGCATGTGATGAGATGATATATCATGTAGGGTCGTCGATGGCAAATCCAGTGAAATACCATGATCTGCGTGACTATGGATTCAGATATTTCAGCGCAAAACCATGCTTAGACAAGGAAGGAAATGCCATAAGAGTTGGCAAGGTTACGGTGTTGGAGAGCATGGCTAGCTTCCAGAGATACTTGTTCATTCGCTACTTGGTTCCATTAAAGGGGTTAGAGCTAGTGAACGTAGCATTTTGCCACTACTTTGAGGGAACCTATTTAGATATCAACAGGAAGATCTCTATTGTTAAGCGTTTGGTTCAACTTTACAGGCCCTATTTGTTCTTCAGTGGCATATTTGATGACATGAACAGAGAGAAATTGCAGATGGCAGCCAAGCAAGGTGGAGCAGAGATGGATTTGTATTACTTCGACCCAAAAATCATTGACTGGGAGGACTACTTTATGAATGTCCACTTCCCTGGCATTGTCAAATATGTCTTCAAGTGA 1482 0.4082 MEIGSITEFLKDKNVLVIGATGFLAKIFIEKILRVQPNVKKLYLLLRAKDAESATRRLHNEILGKELFRLLKEKVGAKFNSFVSEKLTLVPGDISYEDFNLKDSILRQELYNELDVIVNLAATTNFDERYDVALGLNTFGVKHVLSFAKNCTKLKVLVHVSTAYVCGERGGVIVEDPHKMGVSLNGVQGLNIVEEKKIVEKKLKQLQQDGATEEEIKISMKDLGMERANEYGWPNTYVFTKAMGEMLVETLKEDMPVVILRPTIVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLKKVFDVIPADMVVNAILAAMVGHGSNNEACDEMIYHVGSSMANPVKYHDLRDYGFRYFSAKPCLDKEGNAIRVGKVTVLESMASFQRYLFIRYLVPLKGLELVNVAFCHYFEGTYLDINRKISIVKRLVQLYRPYLFFSGIFDDMNREKLQMAAKQGGAEMDLYYFDPKIIDWEDYFMNVHFPGIVKYVFK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00234 493 Pfam Male sterility protein 395 493 IPR033640 -
Aip03g00234 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 330 IPR036291 -
Aip03g00234 493 Pfam Male sterility protein 19 318 IPR013120 -
Aip03g00234 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 492 IPR026055 GO:0080019
Aip03g00234 493 Gene3D - 7 385 - -
Aip03g00234 493 CDD FAR-N_SDR_e 13 364 - -
Aip03g00234 493 CDD FAR_C 393 492 IPR033640 -
Aip03g00234 493 PANTHER FATTY ACYL-COA REDUCTASE 2 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00234 Aip-Chr3 2313299 2315980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00234 110 492 Acyl Lipid Metabolism Gene Families AT4G33790 59.269 1.16e-172 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00234 K13356 - gmx:100793197 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00234 03 2313299 2315980 Aip03g00234 03 2313299 2315980 ECH