Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00229 ATGCAGCATGAACAACAGACGGACAACATTTCCACCATCATCCATGCATTTTCCATGAAACCCACTCTTCGCCCACTCTTCGCACTTCTCCTCCTCTTCCTAGCCACCCTCACTTCACGGGCCATGCTCCGCCGCCCCCACACGCACCTCAACTCCACGCTCCTCCGCCACGCCGCCATCCAGATCGCCGACCACAACCTCAACCACGACATCCGGAAGCTCCTCGATGGTAACTTCGGCAGCCAGCTCCGCCTCCGGACCTTCATCTCGTGGCGGCGGATCATCCATCACGACGTCGCTAGCGCCGGAGACAGATCCTCCTCCCGGAGCACCATTCCGGCGACGCTCCGTTCCCCTCTGTTCTACCGTTACTGGCTTGATTTCCGTAAGGTCCTGAACGATTGGGCGAGGAAGAAGCGATTCCAAGCAAATATCATGGATGAGCTGATTCGGTTGGTGAAAGCCCCCATTGACAAGAAAAACGGTATCTTGGATGGGAATTTACGAAAATACGGTTCTTGTGCGGTTGTGGGGAACAGCGGGATCCTGTTGAAGAGTGATTATGGTAGGTTGATTGATTCGCACGATGCAGTGATAAGGCTGAACAATGCGAGGGTGAATAACTTTGAGAACAAGGTTGGGAAGAAGACAACAATATCATTTGTGAATAGCAACATTGTGCACCTTTGTGCCAGAAGAGTTGGGTGCTATTGCCACCCTTATGGCTCTCACATCCCCATTGTTATGTATATTTGTCAGGCCGTCCACTTTCTTGATTTCACTGTCTGCAATGCTTCCCACAAGGCTCCCCTCTTGGTAACTGATCCCAGGTTTGATGTCTTGTGCGCAAGGATTGTCAAGTACTATTCATTGAAGAGGTTTGTGGAGCAAAGTGGCAAGACCTTGGACGAGTGGGGGAGTGCCCATGATGGGGCTCTCTTCCATTACTCTTCTGGATTGCAGGCCGTCATGCTTGCTCTCGGCATTTGTGATCAAGTTAGCATCTTTGGATTTGGTAAATCAGCTTCTGCCAAACACCATTATCATACCAACCAGAAGGCTGAGCTCCATTTGCACGATTACGAGGCTGAGTATCAGTTCTACCGCCACCTTGTCGATCGCCACAACCCTATACCATTCCTCTCAGACAACTTCAACCTCCCCCCTGTTGTTTTTTATCACTGA 1185 0.5097 MQHEQQTDNISTIIHAFSMKPTLRPLFALLLLFLATLTSRAMLRRPHTHLNSTLLRHAAIQIADHNLNHDIRKLLDGNFGSQLRLRTFISWRRIIHHDVASAGDRSSSRSTIPATLRSPLFYRYWLDFRKVLNDWARKKRFQANIMDELIRLVKAPIDKKNGILDGNLRKYGSCAVVGNSGILLKSDYGRLIDSHDAVIRLNNARVNNFENKVGKKTTISFVNSNIVHLCARRVGCYCHPYGSHIPIVMYICQAVHFLDFTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEQSGKTLDEWGSAHDGALFHYSSGLQAVMLALGICDQVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYQFYRHLVDRHNPIPFLSDNFNLPPVVFYH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00229 394 Pfam Glycosyltransferase family 29 (sialyltransferase) 138 374 IPR001675 GO:0006486|GO:0008373
Aip03g00229 394 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 41 394 - -
Aip03g00229 394 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 41 394 - -
Aip03g00229 394 Gene3D Glycosyl transferase family 29 100 377 IPR038578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00229 Aip-Chr3 2279396 2280580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00229 169 378 Glycosyltransferase AT3G48820 26.389 2.51e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00229 K00786 - gmx:100789506 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00229 03 2279396 2280580 Aip03g00229 03 2279396 2280580 ECH