Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00210 ATGGACAAAAAGGTCAAGTGGAGCTGGACCTCCGCCCTTATCGGAGCGGCATCAGCGGTGGCAGCCACGGCGGTGCTCTCAGCGAAGCCCAAGGACCCCACCTTCCACCTTATCTCCATCAACTTCACATCTTTCAAGCTCAACCTTCCAACCATCCTCGATGCAGAACTAGTCCTCACAGTCCATGTCACCAACCCCAACATCGCACCCATTCACTACTCCTCCACCGCCATGTCCATATTCTACCAGGGATCCCTCCTCGGCTCGGCCGCTGTAGCTGCCGGCTCCCAGCCCCCACGCTCCTGCCAGCTCCTCCGCCTCCCTGCGCGCCTCCGCGGCCTGGAGCTCGCCCAGCACGCCAAGTGCTTTGTCGCTGACGTGGCCAGGCGGGAGATGGTGCTTGACGCCGCCGTGGATATCAGCGGCACCGCCAGGGTGCTTTGGTGGGACCACAATTTTAAGGTGCACGTTGACAGCCACGTTACCGTCGATCCTGTGTTCCTTGATGTCATTGATCAGGAAAATACTTCGGAACTTGAACTTTTTGCCGCTTAA 555 0.5874 MDKKVKWSWTSALIGAASAVAATAVLSAKPKDPTFHLISINFTSFKLNLPTILDAELVLTVHVTNPNIAPIHYSSTAMSIFYQGSLLGSAAVAAGSQPPRSCQLLRLPARLRGLELAQHAKCFVADVARREMVLDAAVDISGTARVLWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELELFAA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00210 184 SUPERFAMILY LEA14-like 21 162 - -
Aip03g00210 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 171 - -
Aip03g00210 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 171 - -
Aip03g00210 184 Pfam Late embryogenesis abundant protein 60 157 IPR004864 -
Aip03g00210 184 SMART why 40 156 IPR013990 GO:0009269
Aip03g00210 184 Gene3D - 13 166 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00210 - - ahf:112736145 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00210 03 2142149 2142716 Aip03g00210 03 2142149 2142716 ECH