Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00205 ATGGCGCCTAGAAAATCACCGCGCGAGCGCCAAATGCTGGTACTCGAGTCGGTCATCGCCCTCGTGTTCGTGCTGGTAGCCTGCGTCGAGCTCTGCGACGGCGCCACCGTCGTCGATGTCTACCGTCTCATTCAGTACGACATATCCGGCGCCCCCTTCGGATCTCGCCTCGCCGGACTCAATCACCACGCCACCTCCCTCCACTTCTCTCCGCACGCCGATCTCTCTCGCACAGTACTTCTCATTCCTCTTCGCGAGTTCAACATCTCCTTCGTCAAAGAATATATTGCAGAAAACAAGCCTCTGGGGGGTTTGTTATTCTTGCTGCCACAGATATTCAATTTTGAAAATAAAGGTGAAGTGGGAAGTAACCATTTAGATGGAACTGAAGAGTTGCTGAAGAATGTGTTGGCTGAACTTGAACAGATACTTATACGTACCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGATGACAACATTAATGCTGTATTAGCTGATATCAAGAAGAGTGATATCACTGGTCAGCCAGCTACTGCAACTACTGGCGGATACAAATTTGTTGTTTCAGCTCTAGAACCAAAGAGTCTTGTCTCTCCATCCATTACCAACATTCAGGGGTGGTTGACAGGACTGAAGGCAGGTGATGATGCACATCAATTACCCACCATCGCAGTAGTGGCATCATATGACACCTTTGGAGCTGCTCCTGCATTATCAGTGGGAAGTGATAGTAATGGAAGTGGTGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCACTTTTGTATTCTAATCCAAAGACCAGAGGCCAATACAATCTGTTGTTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACCCGTAAGTGGCTTCGGAGCTTTGATCAACGATTGCGTGAAAGCATTGACTATGCTATTTGCATAGATAGTATTGGCTCCTGGGAGAATGAATTGTGGATTCATGTGTCTAAGCCTCCAGAAAATGCCTACATTAAGCAAATCATGGAAGATTTTTCAAGTGTTGCAGAAGAGTTAGGCTTTAATGTGAATTTGAAGCATAAGAAAATAAATATCTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGTTGAGAGTTACTGCTGCCACTCTTTCTGAACTTTCGGCTGCACCTGAACTGCTGGAAAAGACTGGTGGTTTGATTGACAGCAGGCATTTTGTAGATGAAAAGGCAATTATCAGAGGTGTGAAATTAGTTGCTGAGAGTCTTGCGCGGCATATTTACGGACATCAAGGAAAGAACATCCAAATCTTTGCAGACAATAGTAACTTGGCTGTAAATCCTTATTATATCCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTGGCACCATTTTTCTCGAAAGATGATCCTTTTGTCATGGCTCTGAAAAAGGAATTAGAAGATCATACAGATGAGGTCAATCTGCAACGCGAAGCTCTAGATGGGATGTTCACATTTTATGATTCTACTAGCGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTGTTATTGCTTCTAGTACTGGGGTCGTATTTAATTGTGCTGTTCAGTTTCTTGGTCATCACAACTAGGGGTCTTGATGATCTGATCAGTTTATTTCGGCGGCCTCCCTCACGAAAAGTGAAGACTGCATAA 1695 0.4413 MAPRKSPRERQMLVLESVIALVFVLVACVELCDGATVVDVYRLIQYDISGAPFGSRLAGLNHHATSLHFSPHADLSRTVLLIPLREFNISFVKEYIAENKPLGGLLFLLPQIFNFENKGEVGSNHLDGTEELLKNVLAELEQILIRTNLPYPVYFAFEDDNINAVLADIKKSDITGQPATATTGGYKFVVSALEPKSLVSPSITNIQGWLTGLKAGDDAHQLPTIAVVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICIDSIGSWENELWIHVSKPPENAYIKQIMEDFSSVAEELGFNVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLEKTGGLIDSRHFVDEKAIIRGVKLVAESLARHIYGHQGKNIQIFADNSNLAVNPYYIRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNLQREALDGMFTFYDSTSAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00205 564 SUPERFAMILY Zn-dependent exopeptidases 197 422 - -
Aip03g00205 564 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Aip03g00205 564 Gene3D Zn peptidases 150 414 - -
Aip03g00205 564 CDD M28_nicalin_like 137 430 - -
Aip03g00205 564 PANTHER NICALIN 11 563 - -
Aip03g00205 564 Coils Coil 126 146 - -
Aip03g00205 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Aip03g00205 564 PANTHER NICALIN 11 563 IPR016574 GO:0009966|GO:0016020
Aip03g00205 564 PIRSF Nicalin 3 559 IPR016574 GO:0009966|GO:0016020
Aip03g00205 564 Pfam Nicastrin 224 361 - -
Aip03g00205 564 Coils Coil 475 495 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00205 4 562 EF-hand Containing Proteins AT3G44330 72.954 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00205 - - gmx:100779713 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00205 03 2062271 2070620 Aip03g00205 03 2062271 2070620 ECH