Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00196 ATGGGGAAGAAGACGAAGAAGCCTGGCAAAGGCAAAGAAAAAACAGAGCGAAAAACCGCCAAAGCCGAAGAGAAGCGAGCTCGCAGAGACTCCAAGAAGCTCTCTCCCGAAGACGACATCGACGCCATTTTACTAAGTATTCAAAAGGAAGAGGCAAAGAAGAAGGAAGTCCACGTTGAAGACAACGTCCCCGCACCGTCACCTCGCTCCAACTGTACGCTCACAGTAAATCCCTTGAAAGAGACAGAGTTGGTTCTCTACGGTGGTGAATTCTACAATGGCAACAAGACTTTTGTGTATGGTGATCTTTACCGGTATGATGTGGAGAAGCTGGAGTGGAAATTGGTTTCGAGTCCGAATAGCCCGCCTCCACGCAGTGCTCACCAGGCAGTTGCTTGGAAGAACTATATTTATATTTTTGGTGATTCACTAGTCCTTTGTCTCCGTGTGTTTGCTCATAGTTTCGATTTTTGGATGTTCGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTAAAGGGATGCCCGAGTCCACGGTCAGGACACCGAATGATATTATACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGATACACTTAGAGAAGTGAGGTTGTATTACAACGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCTTCTGGTCGTAGTGGCTTTCAATTATTTGTTTACCAAGATGATATATTTCTGTATGGTGGCTATTCGAAAGAAGTTTCTTCTGATAAGAATGGATCTGAAAAAGGAATAGTTCATTCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTAGTTAAGAAAAGTGGAATGCCTCCTGGGCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTTCTGTTTGGTGGTGTTGTGGATATGGAAGTAGAAGGTGATGTGATGATGAGCTTGTTCATGAATGAGCTTTATGGCTTCCAGTTAGATACCAATCGCTGGTATCCTATAGAGTTGAGAAAGGAGAAGTCAACAAAAGATAAGTTAAAAAAGAATGAACAAAAGTGTATTGGTGACGTTGATAATAAGACAGAAGAAACTGAGGATTTAGAGTATGAAGAAGGCGAGATTGATGATATATCTCAAAATATTGCTTCAACCGTGACTATTGCTGATAGTGAACCACTAGCCAAATCTGAAGGAAAGTCTAAGGAATCCCGTGCTAAGACTGATGTTCAGAGTTCTTCCTTGCCTGAGGTTGTAGTGAAGCCTTGTGGACGTATTAACTCCTGCATGGCAGTTGGAAAAGATACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATTACTCTTGATGACTTGTACTGTTTAAACCTCAGCAAACTTGATGAATGGAAGTGCATAATACCGGCATCAGAATCTGAATGGGTGGAAGTCTCGGAGGAGGATGATGATGAAGACGATGAGGAAGAGGATGGTGAAGATGAATCTGATGGGGATAGCGGAAGCGATGAGAATGAAGATGACGAAGAAGAGGAGGAAGAGGTGCACAATCAGAATGCATCAGTTCAGATGGGAGATGCTGTTGCTTTAATCAAGGGAGTCGGAAAGAATCTGCGTAGGAAAGAGAGGAGGTCACGGATAGAGCAGATCAGAGCTAGCCTTGGCTTGTCAGATTCACAGAGAACACCATTGCCAGGAGAATCGTTGAGGGACTTCTACAGACGTACAAATATGTATTGGCAAATGGCAGCGCATGAACATACTCAGCACACTGGGAAGGAACTTCGCAAGGACGGTTTTGATCTTGCTGAAGCTCGATACAGAGAGCTAAAACCAATTCTTGATGAGCTGGCTCTATTAGAAGCTGAGCAGAAAGCTGAAGAGGCTGAAGGGCCTGAAACAAGTAGTAATGCAAAGAAGAGAGGCAAGAAGAAAACCAGAAATTGA 1992 0.4302 MGKKTKKPGKGKEKTERKTAKAEEKRARRDSKKLSPEDDIDAILLSIQKEEAKKKEVHVEDNVPAPSPRSNCTLTVNPLKETELVLYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGDSLVLCLRVFAHSFDFWMFDLKTNQWEQLNLKGCPSPRSGHRMILYKHKIILFGGFYDTLREVRLYYNDLFVFDLDQFKWQEIKPKPGAMWPSGRSGFQLFVYQDDIFLYGGYSKEVSSDKNGSEKGIVHSDMWSLDPKTWEWNKVVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDMEVEGDVMMSLFMNELYGFQLDTNRWYPIELRKEKSTKDKLKKNEQKCIGDVDNKTEETEDLEYEEGEIDDISQNIASTVTIADSEPLAKSEGKSKESRAKTDVQSSSLPEVVVKPCGRINSCMAVGKDTLYIYGGMMEIKDQEITLDDLYCLNLSKLDEWKCIIPASESEWVEVSEEDDDEDDEEEDGEDESDGDSGSDENEDDEEEEEEVHNQNASVQMGDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPETSSNAKKRGKKKTRN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00196 663 SUPERFAMILY Kelch motif 82 481 IPR015915 GO:0005515
Aip03g00196 663 Gene3D - 40 368 IPR015915 GO:0005515
Aip03g00196 663 MobiDBLite consensus disorder prediction 405 425 - -
Aip03g00196 663 Pfam Galactose oxidase, central domain 441 484 - -
Aip03g00196 663 Pfam Galactose oxidase, central domain 68 122 - -
Aip03g00196 663 MobiDBLite consensus disorder prediction 12 36 - -
Aip03g00196 663 Pfam Galactose oxidase, central domain 155 184 - -
Aip03g00196 663 Pfam Galactose oxidase, central domain 246 306 - -
Aip03g00196 663 Pfam Domain of unknown function (DUF4110) 570 654 IPR025183 -
Aip03g00196 663 MobiDBLite consensus disorder prediction 639 654 - -
Aip03g00196 663 MobiDBLite consensus disorder prediction 487 537 - -
Aip03g00196 663 MobiDBLite consensus disorder prediction 1 36 - -
Aip03g00196 663 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 655 - -
Aip03g00196 663 MobiDBLite consensus disorder prediction 639 663 - -
Aip03g00196 663 MobiDBLite consensus disorder prediction 490 530 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00196 91 315 Acyl Lipid Metabolism Gene Families AT3G05420 27.615 1.20e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00196 - - gmx:100818228 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00196 03 1997884 2005955 Aip03g00196 03 1997884 2005955 ECH