Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00189 ATGGCAGCACTTACCACCATAATCTCTACCTCCTCCTCTTCTTCACTCTTAACAAAAACACAACATAGCCTCCTCAAACACAACAAAGACCACGATCATGTTCCTGTTCCTGTTCCATCATCATCTTTCATGGGCACCCCAACAACAATTTCCCTTAAGTCAACAAGACCAAGAACAGTGGGAATTGTTAGTGTTTCTTCTTTTAGAGTGAGCTGTTCAGCTGCTTCTTCTTCTTCCACTGTTGTTCCCTCTGCTCTTCTCTTTGACTGTGATGGAGTTCTTGTTGACACTGAGAAAGATGGCCACCGCATTTCTTTCAATGAAACCTTCCAAGAGAAAGAGTTAGGTGTGACCTGGGATGTGGACTTGTATGGAGAACTGCTCAAAATTGGAGGTGGAAAAGAAAGGATGACAGCATACTTTAACAAGACAGGTTGGCCGGCGAATGCCCCGACAGGCGAAAAAGAAAGAAAAGATTTCATAGCTTCACTCCACAAGCGGAAGACGGAGCTATTCATGGCTCTCATTGAGAAAAAGCTGTTGCCTCTTCGTCCAGGTGTTGCAAAGCTTATTGATCAGGCTTTAAGCCAAGGAGTTAATGTAGCAGTGTGCAGCACTTCTAATGAGAAGGCGGTCTCTGCAATAGTATCATTCTTGCTAGGGCCTGAGAGGGCAGAAAAGATAAAGATATTTGCTGGAGATGTTGTTCCCCGGAAAAAGCCAGATCCGGCAATCTATCTCTTAGCCGCTAGCACTCTCGGCGTTGAACCTTCAAGATGTGTTGTGGTTGAGGACAGTGCCATAGGCCTAGCAGCTGCAAAAGGAGCAGGGATGAAGTGTATAATAACAAAGAGCGGCTATACAAAAGATGAAGATTTCTTAAATGCAGATGCTGTGTTTGACTTCATTGGTGATCCTCCTGAGGAGAGATTTGATTTAGCATTCTGTGGAAACCTCCTTGAGAAGCAGTATGTGAGCTAG 981 0.4455 MAALTTIISTSSSSSLLTKTQHSLLKHNKDHDHVPVPVPSSSFMGTPTTISLKSTRPRTVGIVSVSSFRVSCSAASSSSTVVPSALLFDCDGVLVDTEKDGHRISFNETFQEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPTGEKERKDFIASLHKRKTELFMALIEKKLLPLRPGVAKLIDQALSQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKGAGMKCIITKSGYTKDEDFLNADAVFDFIGDPPEERFDLAFCGNLLEKQYVS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00189 326 Gene3D - 85 301 IPR023214 -
Aip03g00189 326 SUPERFAMILY HAD-like 84 302 IPR036412 -
Aip03g00189 326 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 65 325 IPR044999 GO:0016787
Aip03g00189 326 PANTHER CBBY-LIKE PROTEIN 65 325 - -
Aip03g00189 326 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 167 282 IPR006439 -
Aip03g00189 326 SFLD phosphoglycolate phosphatase 82 309 - -
Aip03g00189 326 Gene3D Putative phosphatase; domain 2 97 181 IPR023198 -
Aip03g00189 326 Pfam Haloacid dehalogenase-like hydrolase 86 282 IPR041492 -
Aip03g00189 326 CDD HAD_CbbY-like 85 285 - -
Aip03g00189 326 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 82 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00189 Aip-Chr3 1907240 1910832 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00189 - - gmx:100816266 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00189 03 1907240 1910832 Aip03g00189 03 1907240 1910832 ECH