Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00188 ATGAAAATGGCGGAACAAATCGAAGCAAAGGTCGCAGCAGCAGCACCACCACCACCAACAACCGAAGCTGCAGAGATTCCTTCTAGCTCCAATTCCAAGGGTCTTAACCCTACCAAGCTCGTTGTTCTCGCTGACCTCAACGATCCTCCTGAAGCTGCCGACGACGACGACCCCCTCCCTCTCCCCCTCCACCATAATCTCCCTCCTCCTCCACCGCCACCACCGCTGCCGCCACCTCCTATCACCAGGTTGGCAAATGATGAAAACAGCCAAGACAAGAGTTTGTTGTCCAAAGAAAATGATACAGTTGAAGGTGAAGGTAAAAAGTTGAACAAATTGGGGAAATCTCGCTCCAGGCTTAGCAAGACAGATTCTTCTCTTGACTGTGGAGCTGATGCAGATGGTGATCAACATGTTCAGGGGGCTAATTCCTCTCGGGAGGAAAAAGTTAGCAGCATGAAAACTGGCTTGGTTCATGTTGCAAGAAAGATGCCCAAGAATGCTCATGCTCATTTTATTCTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCTATATTAGCTTATGAGAAGGCTGCTGAGATCTTACTCAAGCCTGAGGCTGAGATTGACAGGCCAGAGTTGCTTTCGTTAGTTCAGATTCATCATGCACAGTGCCTGATACTAGAAAGTTCATCAGAAAATAGTTCAGATAAAGAACTTGAACCTCATGAACTCGAAGAAGTTCTCTCTAAACTCAAAGAGTCAATGCAGTCAGATATCAGACAGGCAGCTTTATGGAATACACTAGGTTTTATTCTTCTTAGGAGTGGCCGTGTGCAGAGTGCTATCACAGTTTTGTCATCATTGTTGGCCATTGCACCGGAGAACTATGATTGCTTGGGGAACCTTGGGATAGCTTATCTTCAAAGTGGGAATTTGGAATTATCTGCAAAATGTTTCCAGGAGCTCATCCTGAAGGATCAAAACCACCCTGCAGCTTTAGTAAATTATTCTTCCCTACTTTTGTGTAAACATGCTTCAGTCGTAGCAGGTGCTGGTGCCAGTGCTGCTGAAGATGCTTTGGCAGATCGTGCTATGGCTATTCATGTTGCTAAGGAATGCTTGTTATCTGCAATTAAAGTGGATGGCAAATCAGCCCATATATGGGCAAATCTTGCAACTGCATTTTCTCTGAGTGGTGATCATCGAACATCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGATGCAGAAAGATCTCAAGATCCTAGTGAACTGCTTTCATGCGCTGGAAACGAGATGGCTTCTATAATAAGGGATGGTGATTCATCACTGGTTGAGCTTCCAATAGCATGGGCTGGGCTTGCCTTGGTTCACAAATCTCAGCATGAGATAGCAGCCTCGTATGATAGTGAACATCATGAGTTGATGGAAGTTGAAGAGCGCACTGTTAGCAGTTTAAAGCAGGCTATAGCAGAAGATCCAGATGACCCTATGCAGTGGATTCAACTTGGCCTCCATAGTCTTTGCGCTCGGCAATTCAAAACATCACAGAAGTACCTCAAAGCTGCTGTTGCCTGTGACAAGGACTGCAGCTATGCTTGGTCTAACCTAGGTGTTTCCCTTCAACTATCAGATGAACCGTTACATGCCGAAGAAGTATATAAGAAAGCTTTGTCTTTAGCAACTACCGAACAAGCACATGCGATATTATCCAACTTGGGGATTCTCTACCGCTTTCAAAGACAATACCAACGAGCTAAGGCTATGTTTTCAAAGTCACTTGAACTTCAACCTGGATATGCCCCTGCATTCAACAACCTGGGTCTTGTGTTTGTAGCTGAGAGTCTTTTGGAAGAAGCCAAGTATTGTTTTGAAAAAGCCCTTCAATCAGACCCTTTGCTTGATGCAGCCAAGTCCAACTTGGTTAAGGTGATTTCCATGTCAAACTTGTGTAGAGACCTCTCTTCATGCCACGTTAAAGAATGA 2028 0.4487 MKMAEQIEAKVAAAAPPPPTTEAAEIPSSSNSKGLNPTKLVVLADLNDPPEAADDDDPLPLPLHHNLPPPPPPPPLPPPPITRLANDENSQDKSLLSKENDTVEGEGKKLNKLGKSRSRLSKTDSSLDCGADADGDQHVQGANSSREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLSQPQKAILAYEKAAEILLKPEAEIDRPELLSLVQIHHAQCLILESSSENSSDKELEPHELEEVLSKLKESMQSDIRQAALWNTLGFILLRSGRVQSAITVLSSLLAIAPENYDCLGNLGIAYLQSGNLELSAKCFQELILKDQNHPAALVNYSSLLLCKHASVVAGAGASAAEDALADRAMAIHVAKECLLSAIKVDGKSAHIWANLATAFSLSGDHRTSSKCLEKAAKLEPNCMSTRYAVAIHRIKDAERSQDPSELLSCAGNEMASIIRDGDSSLVELPIAWAGLALVHKSQHEIAASYDSEHHELMEVEERTVSSLKQAIAEDPDDPMQWIQLGLHSLCARQFKTSQKYLKAAVACDKDCSYAWSNLGVSLQLSDEPLHAEEVYKKALSLATTEQAHAILSNLGILYRFQRQYQRAKAMFSKSLELQPGYAPAFNNLGLVFVAESLLEEAKYCFEKALQSDPLLDAAKSNLVKVISMSNLCRDLSSCHVKE 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00188 675 SMART tpr_5 382 415 IPR019734 GO:0005515
Aip03g00188 675 SMART tpr_5 511 544 IPR019734 GO:0005515
Aip03g00188 675 SMART tpr_5 545 578 IPR019734 GO:0005515
Aip03g00188 675 SMART tpr_5 581 614 IPR019734 GO:0005515
Aip03g00188 675 SMART tpr_5 615 648 IPR019734 GO:0005515
Aip03g00188 675 SMART tpr_5 293 326 IPR019734 GO:0005515
Aip03g00188 675 SMART tpr_5 168 201 IPR019734 GO:0005515
Aip03g00188 675 SMART tpr_5 259 292 IPR019734 GO:0005515
Aip03g00188 675 Gene3D Tetratricopeptide repeat domain 582 663 IPR011990 GO:0005515
Aip03g00188 675 SUPERFAMILY TPR-like 165 646 IPR011990 GO:0005515
Aip03g00188 675 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 27 673 - -
Aip03g00188 675 Pfam Tetratricopeptide repeat 382 415 IPR019734 GO:0005515
Aip03g00188 675 Pfam Tetratricopeptide repeat 168 197 IPR019734 GO:0005515
Aip03g00188 675 ProSiteProfiles TPR repeat profile. 382 415 IPR019734 GO:0005515
Aip03g00188 675 Gene3D Tetratricopeptide repeat domain 155 218 IPR011990 GO:0005515
Aip03g00188 675 MobiDBLite consensus disorder prediction 1 151 - -
Aip03g00188 675 MobiDBLite consensus disorder prediction 62 82 - -
Aip03g00188 675 ProSiteProfiles TPR repeat profile. 615 648 IPR019734 GO:0005515
Aip03g00188 675 ProSiteProfiles TPR repeat profile. 581 614 IPR019734 GO:0005515
Aip03g00188 675 Pfam Tetratricopeptide repeat 583 610 - -
Aip03g00188 675 Gene3D Tetratricopeptide repeat domain 225 353 IPR011990 GO:0005515
Aip03g00188 675 ProSiteProfiles TPR repeat profile. 259 292 IPR019734 GO:0005515
Aip03g00188 675 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 27 673 - -
Aip03g00188 675 MobiDBLite consensus disorder prediction 92 122 - -
Aip03g00188 675 Gene3D Tetratricopeptide repeat domain 494 581 IPR011990 GO:0005515
Aip03g00188 675 Pfam Tetratricopeptide repeat 269 328 - -
Aip03g00188 675 Gene3D Tetratricopeptide repeat domain 354 449 IPR011990 GO:0005515
Aip03g00188 675 SUPERFAMILY TPR-like 367 574 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00188 537 655 Glycosyltransferase AT3G11540 26.613 8.47e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00188 - - adu:107478871 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00188 03 1901872 1906773 Aip03g00188 03 1901872 1906773 ECH