Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00187 ATGGCAGCTCACAGCAACCGCCGCGTGACGCTGCTATGCCGCCCAACCAAACACCTCATCTCAGGATCCGACCCGAAAACATACTGGCTCGTCGGATCCCCCTTCTTACCGCCGCTCACCGTCGCATCCCTCCTCCTCCGCCTCTCCTCCGATGATCTCCACAAAGAATCAGAGGAGCTTCGGACATTGATTCCTAAAGGCTTTGAAGTAATTGGAGCGCTTGCTTACGGAGCCGGCGCCGACGCTCAAGCGGCAGTTCATGCTGCTCGCAGACTGAGGAAGCTTCTATACGGTGAAGAGGAAGGGGATAATCGACCGGTGATCGGAGCAGTCGCCGCCGGTTCCGGCGAGCTGAAATTTTTCGTGTCGGAGAGTGGAAAATCGAATAGCCTCGAAGAGGTTGATTCAGTTGTTGAAGAAGAACATTCGGAGAAGTATGTGTGGGAGAATGGTTGCTTGGTTCGTTGTGAGCTTCCGATCAAGTTGCCAGTATATTATCCTCTCAAGAATACGAGTGATGTTGAGAAAGCATTTGTGAGGGCAATTGAAGCTGTTGTTGCTAAGTTAAGAGATTCACAGGCTGTGTACATGTTAGAGGCATTAAACAAGACCTCTATGGATCTACCTGCACCCATTGTAATTCGTGGTGGCCATTTAGACTTTCGAGCAGACCTCTCCAACATCTGGCATTTGGCTGAGGGTGGTGATAATGTTGATGTGAATTCTCTACCGTGTTCATACTTTTCTGTCATCAGTAAAGGATCGTCAGCATTTTCTGTGGAGAATGCAGATACCATCCAAGTTAGTGTTCTCTTTAACAGCTTAGGGCCATCATCAGCGTCTGCTGTGCCTGTTGCAGAGTACATTCCAGCCCAGGATGAAGCCAGGCTCCTTGTTGTGGATATTAAACTAGATGTACTCTGCTATGCTTCTAAGAACCTCCCCTTGAGGCATGCAGTTTCAAGATTAATCATCCCTGGTTTAGCTGATCAGTTAAATGCATTGCAGAATTCAATGTTGCCTAACCTTTTGGGACAACACCCTCAGATAAAACCTTATCACTTCAGTCCTCCTCATGTTCTGCATCCAATTACTGTTTTCTATGAACTGAGTTTCGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTACACACAAGGTTGGGATTACCTTTTGATCGACCCCTTTTGAGAATCGCTAACGCCTTGGATTTTTCAAAATTGAAAATTGGTGGTCTTGGCTCTCAACAAAAGGGTTCAACTTTACTCAAGGATGTACACATTGGGATTCCAAACAGTGGGGTTTCCGGGGGAAGTGTTTCTCTTGTTCAAGGTTCCTATGAATACTTTCATTATCTTCAGGATGGTTTTAATGATTCGGGATGGGGTTGTGCTTATCGCTCTCTCCAGACTATCATTTCATGGTTCAGACTCCAAAACTACTCATCTATAGAGGTTCCTTCTCATAGAGAAATACAGCAGTCACTTGTGGAGATTGGTGATAAAGATCCTTCTTTTGTTGGGACACGGGATTGGATTGGTGCCATTGAGTTGAGCTTTGTTTTGGACAAACTTCTTGGCGTCACATGCAAAGTGATCAATGTTAGATCCGGAGCTGAGCTTCCAGAAAAATGTCGAGAGCTAGCATTGCACTTTGAGACCCAAGGAACACCTATTATGATTGGTGGGGGTGTACTTGCATATACACTCTTGGGAGTGGATTACAATGAAGCAAGTGGAGATTGCGCATTTTTAATACTCGATCCACACTATACAGGCACAGATGATCTGAAAAAGATCGTTAATGGTGGATGGTGTGGGTGGAAGAAAGCTGTTGATAGCAAGGGAAAGAATTTCTTCTTGCATGATAAGTTTTATAATCTCCTTCTACCACAGAGGCCCAACATGGTTTGA 1920 0.4547 MAAHSNRRVTLLCRPTKHLISGSDPKTYWLVGSPFLPPLTVASLLLRLSSDDLHKESEELRTLIPKGFEVIGALAYGAGADAQAAVHAARRLRKLLYGEEEGDNRPVIGAVAAGSGELKFFVSESGKSNSLEEVDSVVEEEHSEKYVWENGCLVRCELPIKLPVYYPLKNTSDVEKAFVRAIEAVVAKLRDSQAVYMLEALNKTSMDLPAPIVIRGGHLDFRADLSNIWHLAEGGDNVDVNSLPCSYFSVISKGSSAFSVENADTIQVSVLFNSLGPSSASAVPVAEYIPAQDEARLLVVDIKLDVLCYASKNLPLRHAVSRLIIPGLADQLNALQNSMLPNLLGQHPQIKPYHFSPPHVLHPITVFYELSFGETEMKQVEVRRSLHTRLGLPFDRPLLRIANALDFSKLKIGGLGSQQKGSTLLKDVHIGIPNSGVSGGSVSLVQGSYEYFHYLQDGFNDSGWGCAYRSLQTIISWFRLQNYSSIEVPSHREIQQSLVEIGDKDPSFVGTRDWIGAIELSFVLDKLLGVTCKVINVRSGAELPEKCRELALHFETQGTPIMIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGTDDLKKIVNGGWCGWKKAVDSKGKNFFLHDKFYNLLLPQRPNMV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00187 639 SUPERFAMILY Cysteine proteinases 459 596 IPR038765 -
Aip03g00187 639 Pfam Peptidase family C78 442 631 IPR012462 -
Aip03g00187 639 Gene3D - 422 639 - -
Aip03g00187 639 PANTHER - 115 638 - -
Aip03g00187 639 ProSiteProfiles Rhodanese domain profile. 601 619 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00187 Aip-Chr3 1895912 1901082 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00187 K01376 - gmx:100819651 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00187 03 1895912 1901082 Aip03g00187 03 1895912 1901082 ECH