Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00184 ATGGCATCAAGCACAGGGCAGAACCCGGCCCATGACCCGGATACAGATAAACCGGAAAACCCGGATCACGAGTTTGCAGAGTTCGGAGCGGGTTGTTTCTGGGGGGTGGAGCTTGCGTTTCAGAGAGTGGTTGGTGTGGTCAAAACTGAGGTTGGTTACACGCAGGGTCACTCCCATGATCCCACTTACAAGCAGGTCTGCACCGGAACCACCAACCATGTCGAAGTCGTTCGCGTGCAGTTCGATCCCAAACTCTGCACCTACAACGCCCTCTTGGATCTCTTTTGGTCTCGCCATGACCCTACTTCACTCAATCGCCAGGGCAATGATGTGGGTGCACAATATAGATCAGGAATATACTACTACAATGAAACTCAAGCTCGTTTAGCCCAAGAATCAAAAGAAGCTAAGCAATCAGAATTTAAGGGCAAGATTGTCACAGAAATTCTTCCAGCAAAGAGGTTCTACAGAGCAGAGGAATACCATCAGCAGTATCTGGAGAAAGGTGGTGGTAGAGGCCTCAAGCAATCTGCTGAAAAGGGTTGCAATGATCCCATAAGGTGCTATGGTTGA 573 0.4939 MASSTGQNPAHDPDTDKPENPDHEFAEFGAGCFWGVELAFQRVVGVVKTEVGYTQGHSHDPTYKQVCTGTTNHVEVVRVQFDPKLCTYNALLDLFWSRHDPTSLNRQGNDVGAQYRSGIYYYNETQARLAQESKEAKQSEFKGKIVTEILPAKRFYRAEEYHQQYLEKGGGRGLKQSAEKGCNDPIRCYG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00184 190 Pfam Peptide methionine sulfoxide reductase 27 169 IPR002569 GO:0008113
Aip03g00184 190 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 25 168 IPR002569 GO:0008113
Aip03g00184 190 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 1 190 - -
Aip03g00184 190 Gene3D Peptide methionine sulphoxide reductase MsrA 10 190 IPR036509 GO:0008113
Aip03g00184 190 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g00184 190 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 1 190 - -
Aip03g00184 190 SUPERFAMILY Peptide methionine sulfoxide reductase 19 171 IPR036509 GO:0008113
Aip03g00184 190 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 23 180 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00184 Aip-Chr3 1856263 1858445 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00184 K07304 - gmx:100527085 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00184 03 1856263 1858445 Aip03g00184 03 1856263 1858445 ECH