Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00179 ATGGCCAGCACCCACGGTGGTTCTAATAAGATGCAACAGAGGAAGGAAAAGCGGCGGTTGTTCGCGGCGGCCGACGATAGCGCCATGATGAAGCAAATTCAGGCAACTCATCAGCCTGATGGCCGTGAAGTTGATGTGAAACCGATCATTCAAATTGTTGATCAAGTCTTAATTCAACTCATTGCTCGTAGCATTGAGGGTCATCATGAAAAAAGTGAGAACGAGAAATTGGAAGCTGCTGCTGCATTGGCTGAATTTGACATGCTTGACTCGCTGGCTTTTGTCATACACAAAATCTCGTGCGAGCTATCGTGCAAGTGCTCGGGAAGCGGAGATGCACATGGATCAACAATGGTGCTCCTAAACTACCTATCAAGTTATGCATGGCATGGAAAGGTGGTTCTAACCCTAGCATCATTCTCAGTGGTGTTTGGAGAGTTCTGGCTAGTGGCTGAGATGAGCACAAAAGAGAACACACTTGCCAAATCAGTGGCACTTCTTAAACAACTCCCAGACATAGTTGAGAATTCATCTTCATTGATGCCACAATTTGATGCTGTGAACAAGCTTGTGAAGGCTTCATTGGATGTTACAATGTGCATTGTTAAGTTTAAGGAGCTTCCATCTCAATATATTTCTCAAGACTCTCCTCCTATGTCTCTTGCAAGTGCTTATATTCCAATTGCTTCTTATTGGGTTATTAGAAGCATTGTTGCTTGTTCCTCTCAGATTTCTGGTTTCATTGGCATGAGAAATGAGTCGATGTCATCAGCCACAGAGGCATGGGAATTATCTAGCCTTGCTCACAAAATGGCTAGTATATATGAGCACCTCAATAATCAATTGGATCAATGCTATCGAGCCATAGAGGAAAGGATGCAAATAGAGGCCTTCCACAATCTGGTCCGTTTATTTGAGACAGTCCACATAGACAACATGAAAATCCTCAGAGCATTGATATATGCCAAGGATGATTTTCCTCCACTCATTGATGGAACTACCAAAACAAAGACTAGTCTTGAAATCCTAAGGAGGAAGCATGTGCTACTTCTAATATCAGATCTTGACCTATCACAAGAAGAGATAATGGTTCTTGACAACTTATACAAAGATGCAAAAGCAAGAGGTGAAGGACACTATGAAATGGTGTGGATCCCAGTTGTGGAGAAATCTTCATGGAATGAAGCAGCCAATCAAAAGTTTGAGTACTTGCAATCAATGATGGCATGGTATAGTGTTAGAGACCCATTCATAATTGAGCCATCAGTTATAAAGTACATAAAAGAAGTTTGGAACTTTACAAAGAAAGCCATTGTTGTTGCACTTGATCCACAAGGGAGGTTGTCTTCACCAAATGCAATTCATATGATTTGGATTTGGGGTAACTTGGCTTTCCCTTTCACAAGAGAGAAAGAAGAGTCTATGTGGAAGCAAGAGATTTGGAGTCTTGAGCTTCTTGTTGATGGCATTGACCCTAGTGTCTTGGAATGGGTAAATACTTGCAAATTCATATGCCTGTATGGAGGTGAAGACCTTGAATGGATTTCAAAATTCACGACGGCCGCACTTAGCGTTGCGAAAGCCGGCGGATTCGAGCTAGAGATGGTTTATGTGGGGAAGAGCAATGCCAAGGAGAGGATGCAGAAAATGATCAACACATTTGCCACAAGGAAGTTCAGCTACTATTGGCCTAATGTGACTTCAATTTGGTTCTTTTGGGCAAGGTTGGAGAGCATGCTTTACTCAAAGTTACAGCATGGAAGAACAGTGGAGAATGATGAAATCATGAGTGAGGTGATGACTGTGCTTAGCTTTGATGGTAGCGATCAAGGTTGGGCTATATTTTGTAGGGGTGCATCAGAAATGGCTAGAGCCAAAGGTGACACTGCCCTAACAAGCTTGTTGGAATTTGATAAATGGAAGGAGAACATTGATAAGCTTGGTTTGGTCCAAGCTCTCAAGGATTATCTTGATCAGCTTCACACCCCTCACCACTGCAACCGCCTCATACTCCCCGGTAGCACCGGCGGCATACCTCAGAAGGTCGTTTGCGCCGAATGCGGCCGCCAAATGGAGAAGTACTTTATGTATCGTTGTTGCGTCGAGTAG 2109 0.4324 MASTHGGSNKMQQRKEKRRLFAAADDSAMMKQIQATHQPDGREVDVKPIIQIVDQVLIQLIARSIEGHHEKSENEKLEAAAALAEFDMLDSLAFVIHKISCELSCKCSGSGDAHGSTMVLLNYLSSYAWHGKVVLTLASFSVVFGEFWLVAEMSTKENTLAKSVALLKQLPDIVENSSSLMPQFDAVNKLVKASLDVTMCIVKFKELPSQYISQDSPPMSLASAYIPIASYWVIRSIVACSSQISGFIGMRNESMSSATEAWELSSLAHKMASIYEHLNNQLDQCYRAIEERMQIEAFHNLVRLFETVHIDNMKILRALIYAKDDFPPLIDGTTKTKTSLEILRRKHVLLLISDLDLSQEEIMVLDNLYKDAKARGEGHYEMVWIPVVEKSSWNEAANQKFEYLQSMMAWYSVRDPFIIEPSVIKYIKEVWNFTKKAIVVALDPQGRLSSPNAIHMIWIWGNLAFPFTREKEESMWKQEIWSLELLVDGIDPSVLEWVNTCKFICLYGGEDLEWISKFTTAALSVAKAGGFELEMVYVGKSNAKERMQKMINTFATRKFSYYWPNVTSIWFFWARLESMLYSKLQHGRTVENDEIMSEVMTVLSFDGSDQGWAIFCRGASEMARAKGDTALTSLLEFDKWKENIDKLGLVQALKDYLDQLHTPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00179 702 Pfam Sieve element occlusion C-terminus 471 700 IPR027944 -
Aip03g00179 702 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 8 701 - -
Aip03g00179 702 Pfam Sieve element occlusion N-terminus 25 309 IPR027942 -
Aip03g00179 702 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 8 701 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00179 Aip-Chr3 1804206 1816446 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00179 - - gmx:100811452 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00179 03 1804206 1816446 Aip03g00179 03 1804206 1816446 ECH