Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00178 ATGAATACTACTCCTTCTCCTTCTGCTTCTGTCTCTGCCTCTGCGCCCTATAATTTCCTCTTCTCTTCTTGCCCTGCTTCACGCGCTCTCTCTCTAACCGCAACAGCGACACTCTTCCCTTCTCATTCTTCGCCTCCCTCCTCTGTTTCCCTCACCACCTCCTTCTCCTTCCTCCAAAACCCTAATTTCATTACGGGAAACTCTCTCTTCCATTCCATGCAGAGATTCTGCTCTGGCAGCAGCATGAGTAGGAACAAAGCAATGGTGGAAAGTTTGCAGCGTTATGGAGTGATAAGATCAAATAAGGTAGCTGAAGTAATGGAGAGCATTGATAGAGCATTGTTTGTTCCCAACGGGGCTGGAGCTTATATCGACAGCCCCATGTCGATAGGGTACAACGCAACTATATCTGCGCCGCATATGCATGCGATGTGCCTTCAGTTACTGGAGAAGAATTTGCAGCCTGGAATGCATGCTCTCGACATTGGCTCCGGAACAGGGTATTTGACAGCGTGCTTCGGCATGATGGTTAGACCGGAAGGTCGTGCTGTTGGTGTGGAGCATATTCCTGAATTGGTTTCTTCTTCAATAGAGAATATTCAGAAAAGTGCTGCCGCCCAATTATTGAAAGATGGCTCCCTTTCAGTTCATGCTGCTGATGGAAGAAAAGGTTGGCCGGAGTTTGCCCCTTATGATGCCATTCATGTTGGGGCAGCAGCACCTGAAATTCCGCAAGCACTTATTGATCAGTTAAAGCCTGGAGGAAGAATGGTGATCCCAGTTGGAAACATGTTTCAAGATTTGAAGGTGGTGGACAAGAAATCTGATGGCTCTATTAGTGTCCACACCGAGACCTCCGTTCGTTATGTCCCCCTCACCAGTCGAGAAGCTCAACTTCGCGGTTACTGA 909 0.4807 MNTTPSPSASVSASAPYNFLFSSCPASRALSLTATATLFPSHSSPPSSVSLTTSFSFLQNPNFITGNSLFHSMQRFCSGSSMSRNKAMVESLQRYGVIRSNKVAEVMESIDRALFVPNGAGAYIDSPMSIGYNATISAPHMHAMCLQLLEKNLQPGMHALDIGSGTGYLTACFGMMVRPEGRAVGVEHIPELVSSSIENIQKSAAAQLLKDGSLSVHAADGRKGWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNMFQDLKVVDKKSDGSISVHTETSVRYVPLTSREAQLRGY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00178 302 CDD AdoMet_MTases 160 261 - -
Aip03g00178 302 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 84 296 - -
Aip03g00178 302 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 51 302 IPR000682 GO:0004719|GO:0036211
Aip03g00178 302 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 219 234 IPR000682 GO:0004719|GO:0036211
Aip03g00178 302 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 51 302 - -
Aip03g00178 302 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 268 IPR029063 -
Aip03g00178 302 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 82 298 IPR000682 GO:0004719|GO:0036211
Aip03g00178 302 Gene3D Vaccinia Virus protein VP39 79 302 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00178 Aip-Chr3 1792329 1794886 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00178 K00573 - gmx:100810913 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00178 03 1792329 1794886 Aip03g00178 03 1792329 1794886 ECH