Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00176 ATGACAGTGAAGGTGGTGCCTAGTTTGAATGAAGAGAGGTGCCTTGTGGTGAGGGGAAAAGTGGTTCTAACTGATGTTCCCAAAAACATTCAGGTTTCTTCAATTGGCACTGCTGAATCTGATTCTGCTGCTTTTTTGGGTGCTACTTCTCATCTTCCAAGTTCTCGTCATGTCTTCACTCTTGGCATTCTCCGGGGATATAAGTTACTATCACTCTTCAGAGTGAAGATATGGTGGATGATACCAAGGGTTGGAAAATGTGCAAGTGATGTTCCATTGGAGACTCAGTTCTTGCTTCTAGAAGCAAGAGAAGATTCTGCACTCAATGGTGATGATGATAATGATGAAGAGTTTTGTTCTGATTCAGATGAGGATCCTTCAACATCACAAAACACAAACTACATTCTCTTCTTGCCTGTTTTGGATGGACAATTTCGTTCAACTTTGCAAGGAACTCAATCAAATCAGCTCCAATTCTGCGTCGAAAGCGGAGATGCACATATCAAAACTTCACAATCACTAGAAGCTGTATTTGTAAATTCAGGAAACAATCCATTTGAGTTAGTCAGAAACTCTATCAAGATATTGGAAAAACTCAAAGGAAGTTTTAGTCACATTGAGCACAAGAAAATCCCTGCACATCTTGATTGGTTTGGATGGTGCACTTGGGATGCTTTTTACAATCAAGTGAGTCCACAAGGAATAAGAGAGGGCCTTCAAAGTTTCTCAGAAGGAAGTTGTTCACCAAAGTTTCTCATCATTGATGATGGTTGGCAAGACACATTCAATGAGTTTCACAAAGAAGGTGAACCACCAATTGAAGGAATACAGTTTGCAACCAGACTAATAGGCATGAAAGAAAACAAAAAGTTCAACAATGCAGACCTTGACAATTCTTGCAACAATCTTCACAATTTTGTTGATTTCATCAAACACAACTTTGGACTAAAATATGTTTACATGTGGCATGCATTAGCTGGTTACTGGGGAGGAGTATTCCCATCATCAGAAGCTATGAAGAAATACAATCCAAAACTTTCATATCCAATTCAATCACCTGGAAACACAGGGAACCTTAGAGATATAGCCATGGACAGCCTGCAAAAATATGGAGTTGGAATCATGGATCCTGAAAAGCTTCAAGATTTCTACAATGACTATCACAGTTATCTTGCTAGCTGTGGCGTCGACGGCGTCAAAGTTGATGTCCAGAATGTGATAGAAACCTTAGGCTCTGGCCGTGGCGGACGCGTTTCGCTGACGAAATGGTATCAAGAGGCACTAGAGGAATCTATAGCCAAGAACTTCAAGGACAATAACCTCATTTGTTGCATGTCTCACAACTCTGATTCAATATACAGTTCAAAGAAGAGTGCATCAGCAAGAGCATCTGAAGATTTCATGCCAGGAAAGCCAAAACTTCAAACCTTACACATTGCCTCAGTATCCTTCAATAGTCTTCTTGTTGGGGAGATATTTGTGTCTGATTGGGATATGTTCCATAGCAAGCATGACACTGCTGAGTTCCATGCTGCAGCAAGAGCAATAGGTGGTTGTGCAGTATATGTAAGTGATAAGCCTGGAAACCATGATTTTGAGATCCTCAAGAAGTTAGTACTACCTAATGGATCAGTCTTGAGAGCAAGATTCGCCGGCCGCCCGACTCGAGATTGCTTATTTAAAGATCCTGTTATGGATGGTAAAAGTTTGCTGAAGATTTGGAACATGAACAAGTTCACCGGGGTGGTAGGTGTGTTCAATTGCCAAGGAGCAGGAAGCTGGCCACTGAAACCAGTTGATGGAACACCAAATAACATAACCTTATCAGGGAAAGTGAGACCCCTTGATGTGGAGTTTCTAGAAGATGTTGCAGGAGAAAACTGGAATGGAAATTGTGCAATATATGCCTTCAATTCAGGTGTTCTTACCAAGCTACAAAACAAAGAAAAACTAGAAGTGACATTAGAGACTCTTCAATGTGAAATATATACAGTATCACCAATCAGGGTGTTTGGTAATGATGTAGAATTTGCACCAATAGGATTGCTTGACATGTACAATTCAGGGGGTGCAGTTGAATATCTGAACTGCACCATGGATGCTGTTAATGATGAAGAATGCATGGTCAAAATCAAAACCAGAGGATGTGGCAGATTTGGAGCATACTCTAATGTTAGACCAAAACGTTGCATGGTGGAAATGAAGGAAGAAAATGAGTTCTTCTACAACCATGAAAATGGACTACTCACAATTAATCTTGATGGTAGTGATTGCAAATCAAGGGGAATTGAACTTGTATACTAA 2304 0.4036 MTVKVVPSLNEERCLVVRGKVVLTDVPKNIQVSSIGTAESDSAAFLGATSHLPSSRHVFTLGILRGYKLLSLFRVKIWWMIPRVGKCASDVPLETQFLLLEAREDSALNGDDDNDEEFCSDSDEDPSTSQNTNYILFLPVLDGQFRSTLQGTQSNQLQFCVESGDAHIKTSQSLEAVFVNSGNNPFELVRNSIKILEKLKGSFSHIEHKKIPAHLDWFGWCTWDAFYNQVSPQGIREGLQSFSEGSCSPKFLIIDDGWQDTFNEFHKEGEPPIEGIQFATRLIGMKENKKFNNADLDNSCNNLHNFVDFIKHNFGLKYVYMWHALAGYWGGVFPSSEAMKKYNPKLSYPIQSPGNTGNLRDIAMDSLQKYGVGIMDPEKLQDFYNDYHSYLASCGVDGVKVDVQNVIETLGSGRGGRVSLTKWYQEALEESIAKNFKDNNLICCMSHNSDSIYSSKKSASARASEDFMPGKPKLQTLHIASVSFNSLLVGEIFVSDWDMFHSKHDTAEFHAAARAIGGCAVYVSDKPGNHDFEILKKLVLPNGSVLRARFAGRPTRDCLFKDPVMDGKSLLKIWNMNKFTGVVGVFNCQGAGSWPLKPVDGTPNNITLSGKVRPLDVEFLEDVAGENWNGNCAIYAFNSGVLTKLQNKEKLEVTLETLQCEIYTVSPIRVFGNDVEFAPIGLLDMYNSGGAVEYLNCTMDAVNDEECMVKIKTRGCGRFGAYSNVRPKRCMVEMKEENEFFYNHENGLLTINLDGSDCKSRGIELVY 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00176 767 Pfam Raffinose synthase or seed imbibition protein Sip1 10 752 IPR008811 -
Aip03g00176 767 MobiDBLite consensus disorder prediction 108 130 - -
Aip03g00176 767 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 755 - -
Aip03g00176 767 SUPERFAMILY (Trans)glycosidases 214 547 IPR017853 -
Aip03g00176 767 PANTHER - 1 755 IPR008811 -
Aip03g00176 767 MobiDBLite consensus disorder prediction 108 123 - -
Aip03g00176 767 Gene3D Aldolase class I 214 542 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00176 Aip-Chr3 1783226 1788589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00176 15 753 Glycoside Hydrolase AT1G55740 46.605 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00176 - - gmx:100816978 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00176 03 1783226 1788589 Aip03g00176 03 1783226 1788589 ECH