Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00174 ATGGTCATAATAATTTCTTGCACCAAATCCATGATTATCACAATCTTAATCTTGATCATCTTTTGTGCTGTGTTGATTAATGGTGCCAATGTAAAATCTAGTTCCTCTATAGGCACCAAAGGGCAATGGCAACTTCTACTTCACAATTCTGGTGTGGTCAGCATGCACATGGCATTGACCAATCGGAACACGGTTATAATGTTTGACCAAACCGGAGCCGGCCAATCAGGTTACAAATTAAGAAAACGCTACAATGGAACACGGTGCACCACAAGTCACAATGATCTTGTGGATCCTACATGCTATGCACACTCAGTAGAGTATGACATTGCTGCTAACAAAGTTAGGCCTTTGAGGCTTGACCCTGATACATGGTGTTCCTCTGGTTCATTTCTTAGCAATGGAACACTATTGCAAACTGGTGGATATGGCAATGGAGCTAAAAGCATAAGATTCTGTAGACCCTGTGGTGGTGGTGGTGGTGGAAAGAATCTTACATGTGGTTGGATTCAATCAAAGAAGACCCTTTTTGATGAACGGCGGTATGCTTCTAGTCAAATACTCGCAGAACATGACAGAGTTGTTATTGTTGGTGGAAGAAACGTATTCACATATGAATTTGTACCAAAAATTAATCATGAAGAAAAATCTTTTGCTCTTCCATTCTTGCACCAAACCAATGACAAAAATTCAGGAGGGAACAATCTCTATCCTTTTCTTCATTTATCATCTGATGGGAACTTGTTCATTTTCGCAAACCGTGATTCAATCCTGCTCAATGCAAGAAGGAACCGGGTGATCAAGACATTCCCTCGGATCCCCGGACACGGATCAAGAAACTATCCAAGTTCAGGCTCATCTGTGATGCTACCTTTACATCATAAGGACAAGTTCCAAAAGGTGGAAGTTATGGTATGTGGTGGTTCTACTACTGGGGCATTCAGGGCTGCTAACGACGGCATGTTCCTAGAAGGCTTAAGATCATGTGGGAGAATGGTAATTACAGGTAACCATCACAAATGGAACATCGAGTACATGCCGCAACCGCGCCTCCTCCATGACATGCTGATTCTCCCAACTGGCCAAATTTTGATCATCAATGGAGCAAAACATGGTTGTGCAGGGTTTGACAATGCAAGAAATGCTTCTCTTGAACCATACCTGTATAACCCCAAAAGGATACTTGGGAAAAGGTTCAAGGTGCTTAAGTCCACAAGCATTGCCAGAATGCACCATTCATCAGCAACCCTTCTTCCTGATGGAAGGGTCTTGGTTGGTGGTGGCAACCCTCATCCAAGGTACATATTTCGCAATGTGGCATACCCAACAGAATTGAGACTCCAAGCATTTGTTCCACACTACATGGACAAGAGGTACCATAACAAGAGGCCTATGAACTTAACCATAGAATATGGTAATCAAATTGGGTACGGTAAAGAGTTTAGAGTGAAGTTTATGGTGGTTAAGAAGGGGCAAATTAGTAACAATACTGTAACTTTCAGTGCATATGCACCACCATTTACAACACATGCATTTGGCATGAATCAAAGGATGCTTAAGCTTAGGTGCAAGAGAATGGTTGTGAGCAAAAATGGTTCAGTGAATGCAATTTTGGAAGCACCACCATCATCTTTTGTTGCACCTTCTGGTTACTACTTGCTCACTGTTGTTAATGCTGGAATTCCAAGCATTTCTCAATGGATTAGGTTCACACATAATGGTTAG 1725 0.4197 MVIIISCTKSMIITILILIIFCAVLINGANVKSSSSIGTKGQWQLLLHNSGVVSMHMALTNRNTVIMFDQTGAGQSGYKLRKRYNGTRCTTSHNDLVDPTCYAHSVEYDIAANKVRPLRLDPDTWCSSGSFLSNGTLLQTGGYGNGAKSIRFCRPCGGGGGGKNLTCGWIQSKKTLFDERRYASSQILAEHDRVVIVGGRNVFTYEFVPKINHEEKSFALPFLHQTNDKNSGGNNLYPFLHLSSDGNLFIFANRDSILLNARRNRVIKTFPRIPGHGSRNYPSSGSSVMLPLHHKDKFQKVEVMVCGGSTTGAFRAANDGMFLEGLRSCGRMVITGNHHKWNIEYMPQPRLLHDMLILPTGQILIINGAKHGCAGFDNARNASLEPYLYNPKRILGKRFKVLKSTSIARMHHSSATLLPDGRVLVGGGNPHPRYIFRNVAYPTELRLQAFVPHYMDKRYHNKRPMNLTIEYGNQIGYGKEFRVKFMVVKKGQISNNTVTFSAYAPPFTTHAFGMNQRMLKLRCKRMVVSKNGSVNAILEAPPSSFVAPSGYYLLTVVNAGIPSISQWIRFTHNG 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00174 574 PANTHER SECRETED PROTEIN-RELATED 14 572 - -
Aip03g00174 574 Pfam Galactose oxidase-like, Early set domain 472 569 IPR015202 -
Aip03g00174 574 Gene3D - 37 461 IPR037293 -
Aip03g00174 574 SUPERFAMILY E set domains 459 570 IPR014756 -
Aip03g00174 574 SUPERFAMILY Galactose oxidase, central domain 105 456 IPR011043 -
Aip03g00174 574 Gene3D Immunoglobulins 462 573 IPR013783 -
Aip03g00174 574 Pfam Glyoxal oxidase N-terminus 55 308 IPR009880 -
Aip03g00174 574 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 14 572 - -
Aip03g00174 574 CDD E_set_GO_C 459 569 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00174 Aip-Chr3 1757163 1759462 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00174 - - gmx:100814200 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00174 03 1757163 1759462 Aip03g00174 03 1757163 1759462 ECH