Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00140 ATGGATTCTCTCCCTGAATCAACTTCCACCAATGCCCCTACTGCCAAAGGAATCACGGCAATGCCAAGGGCACAGTCAAGCCACCCTTTGGACCCTTTATCTGCTGCCGAAATCTCTGTGGCTGTGGCAACTGTGAGGGCTGCTGGAGCCACTCCCGAGGTTAGGGACAGTATGCGCTTCATTGAAGCAGTTTTGAGGGAACCGGATAAACACATTGTTGCACTGGCAGATGCTTATTTCTTTCCACCTTTCCAGCCATCATTACTTCCTAGAACCAAAGGAGGCCCTGTGATTCCTACCAAACTCCCTCCAAGATGTGCTAGACTTGTTGTTTACAATAGGAAATCAAATGAAACGAGTATATGGATCGTTGAATTATCACAAGTACATGCTGTAACTCGAGGTGGTCATCATCGAGGAAAAGTCATTTCTTCACATGTTATTCCTGATGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAATGTGAGGCTGTTGTTAAAGATTATCCTCCATTTATAGAAGCTATGAAGAAAAGGGGTATTGAAGACATGGAGCTTGTAATGGTTGATCCCTGGTGCACTGGTTATCACAGTGAAGTTGATGCTCCAAGCAGAAGACTTGCCAAACCACTTATATTTTGTCGATCCGAGAGTGACTGCCCTATGGAAAATGGCTATGCTCGCCCAGTTGAGGGAATTCATGTTCTAGTTGATCTGCGAAATATGGTGGTGATAGAGTTTGAAGACCGCAAACTTGTTCCTCTGCCACCTGTTGATCCCTTGAGGAACTATACTCCTGGTGAAACACGAGGTGGCTCTGATAGAAGTGATGTCAAGCCCTTGCAAATTAGTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGACAATATGTAGAGTGGCAGAAGTGGAATTTCCGTGTTGGATTCACACCCAAAGAGGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGGCGAAGGCCTGTAGCACATAGGCTGAGCTTTGTAGAGATGGTTGTACCCTATGGAGATCCGAACGATCCACACTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGGAAAAATGCACATTCTCTCAAGAAGGGTTGTGATTGTTTGGGCTACATCAAATATTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTGGAGACAATTGAAAATTGTATATGTTTGCATGAAGAGGATCATGGAATTCTTTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTTCGAAGGTCTAGAAGGCTTTCAGTATCGTTTATATGCACGGTGGCTAACTATGAGTATGCATTTTTTTGGCATTTTTATCAGGCAAGTAGAATATCACATACCGAAGTTAAGCTTACTGGAATTCTCAGCTTAGGAGCATTGATGCCTGGAGAGCTTCGAAAATATGGAACCATGATTGCTCCAGGTCTATATGCTCCGGTTCATCAACACTTCTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAAGTAGTGGAGGTCAACATGAAAGTTGAGGAAGTTGGTGACCATAATGTTCATAATAATGCATTTTTTGCTGAAGAAACGTTGCTCAAATCTGAGCTGGAAGCGATGCGTGATTGTGAGCCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACAGGCAATAGAACTGGACAGTTGACAGGATTCAAGCTAGTACCCGGCACAAACTGCTTACCATTAGGAGGTCCTGAGGCCATGTTTTTAAGAAGAGCTGCCTTCTTGAAGCATAATCTTTGGGTAACAACATACTCACGCGACGAAATGTATGTATTTGGAGTCACACATGTTCCTCGTTTAGAAGATTGGCCTGTTATGCCAGTGGAGCGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGTTCACCAGCAGTGGATGTGCCTCCAAGTCCCTGTGAATTGGATTCTAAAGATAATGACATCAAGGATAGTAGTGGTGCTACCAAGCCAATTCAGAGTGGCTTAGCTTCAAAGTTGTGA 2076 0.4388 MDSLPESTSTNAPTAKGITAMPRAQSSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFIEAVLREPDKHIVALADAYFFPPFQPSLLPRTKGGPVIPTKLPPRCARLVVYNRKSNETSIWIVELSQVHAVTRGGHHRGKVISSHVIPDVQPPMDAVEYAECEAVVKDYPPFIEAMKKRGIEDMELVMVDPWCTGYHSEVDAPSRRLAKPLIFCRSESDCPMENGYARPVEGIHVLVDLRNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQISQPEGPSFRVNGQYVEWQKWNFRVGFTPKEGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCICLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQASRISHTEVKLTGILSLGALMPGELRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNMKVEEVGDHNVHNNAFFAEETLLKSELEAMRDCEPLTARHWIVRNTRTGNRTGQLTGFKLVPGTNCLPLGGPEAMFLRRAAFLKHNLWVTTYSRDEMYVFGVTHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPSPCELDSKDNDIKDSSGATKPIQSGLASKL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00140 691 MobiDBLite consensus disorder prediction 1 30 - -
Aip03g00140 691 Gene3D - 12 155 - -
Aip03g00140 691 MobiDBLite consensus disorder prediction 677 691 - -
Aip03g00140 691 MobiDBLite consensus disorder prediction 1 16 - -
Aip03g00140 691 PANTHER COPPER AMINE OXIDASE 620 679 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 PANTHER AMINE OXIDASE 2 619 - -
Aip03g00140 691 PANTHER AMINE OXIDASE 620 679 - -
Aip03g00140 691 Pfam Copper amine oxidase, enzyme domain 282 620 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 SUPERFAMILY Amine oxidase N-terminal region 152 270 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 SUPERFAMILY Amine oxidase N-terminal region 26 154 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 Gene3D Copper amine oxidase, catalytic domain 269 620 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 Gene3D - 158 260 - -
Aip03g00140 691 MobiDBLite consensus disorder prediction 664 691 - -
Aip03g00140 691 Pfam Copper amine oxidase, N3 domain 153 256 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 MobiDBLite consensus disorder prediction 263 286 - -
Aip03g00140 691 SUPERFAMILY Amine oxidase catalytic domain 276 661 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 Gene3D Copper amine oxidase, catalytic domain 621 685 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aip03g00140 691 PANTHER COPPER AMINE OXIDASE 2 619 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00140 Aip-Chr3 1383308 1388302 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00140 K00276 - gmx:100798722 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00140 03 1383308 1388302 Aip03g00140 03 1383308 1388302 ECH