Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00008 ATGAAGAATAAGTTGGTGGTGGCGGTGGTGAGTGTGATAGTAGTAGCAGCGAGCGTAGTGCTAGAAGGATGCGAGTGCAGGACAGTGCAATTCATATTTGGGGACTCACTGTCGGATGTTGGAAACAACAAGTACCTGTCCAAGAGCCTCGCTCAGGCTAGCTTGCCGTGGTACGGCATTGATTTCGGAAACGGGCTCCCGAATGGCAGGTTCTCCAATGGGCGCACTGTTGCCGATATCATTGGGGATCAAATGGGCCTTCCAAGGCCTCCTCCTTTCTTGGACCCATCCTTGACAGAAGATGATATTTTGCACAATGGCCTCAATTATGCTTCTGGAGGGGGCGGCATTTTGAATGACACAGGCACCTATTTTATTCAGAGGTTCTCTCTCTACAAGCAAATTGAGCTGTTCGAGGGGACACAAGAACTAATAAGAGAGAAAATCGGGAAAGAGGAGGCAGACAAGTTTTTCAAGGAAGCAAGGTATGTGGTTGCACTGGGCAGCAATGACTTCATAAACAACTACTTGATGCCCGTATACAGGGACTCATGGACTTACAATGATGACACCTTCATACAATACCTGATACAAACACTGAGAGGCCAACTCACGGCTCTGCACGCATTGGGTGCAAGGCAGCTGATGGTCTTTGGGCTGGGCCCAATGGGCTGCATCCCCCTTCAGAGGGTGCTTTCGTCCTCCGCCTCCGGGGGCTGCCAACACAGAACCAACACCCTGGCCCTTAGCTTCAACAAAGCTGCCGCCAAATTGATGGACGACTTGGGGAAACAACTTGCCAATTCAAGCTTCAGATTTGGAGATGCTTATGATGTTGTCAACGATGTCATTTCCAACCCAAACAAGTATGGTTTTGAAAACTCAGATTCACCTTGTTGCTCGTTTGGGAGGATACGACCCGCTCTCACCTGTTTACCAGCTTCAAGGCTCTGCAAAGACAGAAGCAAGTACGTATTCTGGGATGAGTACCACCCCACAGACAGTGCTAACCAGCTCATAGCCAATGAACTTATCAAAAAGTTCGGCTTCTTGCGTCTTAATCAATCTTCATCCTCCCCTTCCCCTTCCCCTTCCCCTGCTATTTGA 1107 0.4914 MKNKLVVAVVSVIVVAASVVLEGCECRTVQFIFGDSLSDVGNNKYLSKSLAQASLPWYGIDFGNGLPNGRFSNGRTVADIIGDQMGLPRPPPFLDPSLTEDDILHNGLNYASGGGGILNDTGTYFIQRFSLYKQIELFEGTQELIREKIGKEEADKFFKEARYVVALGSNDFINNYLMPVYRDSWTYNDDTFIQYLIQTLRGQLTALHALGARQLMVFGLGPMGCIPLQRVLSSSASGGCQHRTNTLALSFNKAAAKLMDDLGKQLANSSFRFGDAYDVVNDVISNPNKYGFENSDSPCCSFGRIRPALTCLPASRLCKDRSKYVFWDEYHPTDSANQLIANELIKKFGFLRLNQSSSSPSPSPSPAI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00008 368 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Aip03g00008 368 SUPERFAMILY SGNH hydrolase 161 347 - -
Aip03g00008 368 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Aip03g00008 368 Gene3D SGNH hydrolase 26 348 IPR036514 -
Aip03g00008 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 5 360 - -
Aip03g00008 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00008 Aip-Chr3 99122 100538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00008 31 344 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 3.47e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00008 - - adu:107463630 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00008 03 99122 100538 Aip03g00008 03 99122 100538 ECH