Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02876 ATGAGTGAAATTATGAAGAATCAAGGTTCACAATGGTGGTGGCTTGACACACACACCATCACTAGAAGATCTCAATGGCTTCAATCCACACTCAATGAACTGAATAAGAAGACACAGGCAATGCTCAAATTAATTGAACAAGATGCAGATTCATTCGCGCAACGCGCAGAGATGTATTACAAGAAGAGGCCAGAGCTTTTAAGCCTTGTTGAAGATTTCTATAAAGCACATCGCTTGTTAGCCGAGCGGTACGATCAGGTCAGGCCGGACACTGGAGCTCGGCTACTGAAGGTTGGAGGGTCGCCTTTTGCTTCTCCAAGTTGTAAATTACAGAAGGCAGTGAGTTTTGCAGATAGTGGTTATGATGATAGCAATTCCGAGAGTTGTGATGTAGAGGACGAGTTTATGGAATCCGAAGTTGATGATCCTGAGCACGAGGATGATGTTCGTTCTGTGGCATCAAGCGATAAAGTGATGATGAAGATAAAGAAAGAAATTCAGAACAAGGGTGATAAGGATCAAATCAAGAAGAAAGATTCCATTTGTGAAGAAATTGTGATGTTGAAGGAAGAAATCGAAAGACTCAAGGAAGAGAATAAAGCACAGAAGGATCAAATTAGACAGAAAGATATAATCTGTGGTGAAGTAATGATGTTGAGGAAAGAAAACGAAAGATTCAGAGAAGAGAATCGAGTGCAGAAGGAAGAACTAAAGCAGAAAGGTAACTTGGTGTGCAAGGAAAAGATTGAGAGACTTGAAGAAGAGAATAGAGAACTTGTGGAGAAGCTTAAGCTGAAAGTTCCTGCCTGTGTTGAATTAATAGAGTTGAGAAAAGAAATTAGAAAATTAAAAGAAGAGAATAGAGCAAAGGAGGATCAAATCAACCAGAAAGATTCCGTTTGTGCTGAAATAACGGTGTTGAGGAAAGAAATACAAATTCTCAGAGAAGAGAATAGATCAAAGGAAGATCAACTGAAGCAGAAAGATAGCTTTCTTGACGAACTAATGGTGTTGAGTAAAGGATTTGGAGAAGAGAATCGGTTGTTGAAGGAAAAACTCGAGCTGAAAGATGCTATGTCTGATGAAGTTATGGTGTTGAGGAAAGAAATAGAAAGACTCAGAGAAGATAATAGAGAAAAGGAGGATCAACTCAAGCAGAAAAGTAGCATTTGTGATGAAGTAATGGTTTTGCAGAAAGAAATTGAAGGGCTCAGAGAAGAGAATAGAACAAAACAGGATCAGCTGAAGTACAAAGATGCAATTTGTATCAAAATAATGACTTTGAGTGAAGAAACAGAGAAACTCAGAGTAGAGAATATAGCTCTGAAGGATCTGCTAAAGAAGAAAGATAACATCTATGATGAAGTATCAGTGATGCTGAGGGAAGAAATTGAAGAACTTCAAATAGAGAATAAGACACAAAAGGCTCATTTGAAGCAGAAAGATGAAGAGAAGATGGGAGTGATTAGGCACCTAAGTTTAGCAATAGATTTGCTTAAGCAAGAGAATGTGAAGATGAGAAGCTTCATTTCCAAGGAACTTGAAAAGAAATGGAACAACCCTTTTAATAAATTGTTCAATAGAGCCTCTAAGAATCAAACTAGTGTTATGCCAGTTTAG 1620 0.3809 MSEIMKNQGSQWWWLDTHTITRRSQWLQSTLNELNKKTQAMLKLIEQDADSFAQRAEMYYKKRPELLSLVEDFYKAHRLLAERYDQVRPDTGARLLKVGGSPFASPSCKLQKAVSFADSGYDDSNSESCDVEDEFMESEVDDPEHEDDVRSVASSDKVMMKIKKEIQNKGDKDQIKKKDSICEEIVMLKEEIERLKEENKAQKDQIRQKDIICGEVMMLRKENERFREENRVQKEELKQKGNLVCKEKIERLEEENRELVEKLKLKVPACVELIELRKEIRKLKEENRAKEDQINQKDSVCAEITVLRKEIQILREENRSKEDQLKQKDSFLDELMVLSKGFGEENRLLKEKLELKDAMSDEVMVLRKEIERLREDNREKEDQLKQKSSICDEVMVLQKEIEGLREENRTKQDQLKYKDAICIKIMTLSEETEKLRVENIALKDLLKKKDNIYDEVSVMLREEIEELQIENKTQKAHLKQKDEEKMGVIRHLSLAIDLLKQENVKMRSFISKELEKKWNNPFNKLFNRASKNQTSVMPV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02876 539 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Aip02g02876 539 PANTHER PROTEIN NETWORKED 3A-RELATED 428 534 - -
Aip02g02876 539 PANTHER PROTEIN NETWORKED 3A-RELATED 10 286 - -
Aip02g02876 539 Coils Coil 216 236 - -
Aip02g02876 539 Coils Coil 356 414 - -
Aip02g02876 539 Coils Coil 178 212 - -
Aip02g02876 539 Coils Coil 242 266 - -
Aip02g02876 539 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Aip02g02876 539 PANTHER PROTEIN NETWORKED 4A 428 534 - -
Aip02g02876 539 PANTHER PROTEIN NETWORKED 4A 10 286 - -
Aip02g02876 539 Coils Coil 457 484 - -
Aip02g02876 539 Coils Coil 273 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02876 Aip-Chr2 105032268 105036299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02876 - - adu:107475911 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02876 02 105032268 105036299 Aip02g02876 02 105032268 105036299 ECH
Aip06g00555 06 7209827 7211601 Aip02g02876 02 105032268 105036299 PCT