Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02728 ATGGCGGAAGAAGAAAAAGTAGAAGGATTACAGCAACTCAAACACGAAAACCAAGATCTTCCACAAGTGCTTGTTCTTGGTTCTCCAACGTGCTTACAAACCTTAAAACAACTCTACTCTCACAAATTCCGTTTTCTTATCCCAAACACTTCGTTGGACTCACTCTACCCTCTCACCGCTCCACTTTCATCCATCTCCGCCGTCATCTGCAGTGCTTCCTTCTCCCTCACCGCCCCCGTCCTCCGCCTCCTCCCCTCCCTCCGACTAGTCGTCACCACCAGTGCCGGCACCGATCACATTGACCTCAATGAGTGTGGCTGCCGAGGGATACAGGTAGCTGGCGCCGGAAAACTGTTTTCCGAGGAGGTGGCTGATATGGCGGTGGGGCTTAAAATATCAGGAAAGCGGATTGGCATAGTTGGACTCGGAAGCATTGGCATGGAAGTTGCTAAGAGACTCGAATGTTTTGGTTGCACCATCTTATACCACTCAAAGCATAAAAAATCTGCAGTTTCATACCCTTTCTATAACAGTGTTATTGACCTTGCTGCTACTAGCAATGCACTTGTTCTCTGTTGTGCACTGAATGAGGAAACAAGGCACATAGTAAACAGGGAAGTGATGTTGGCATTGGGAAAAGAAGGGTTCATTGTGAATGTTGGGAGAGGATCTCTTATTGATGAGAAGCAATTGGTGAAGTTTTTGATGGATGGTGAAATTGGTGGTGCTGCTTTGGATGTGTTTGAAGATGAACCTAATGTTCCTAAAGAGCTACTCAGTATGGATAATGTGGTTTTGACTCCACATTGTGCTGCTTTTACTTCTGAATGTATAATCAAATTGTGTGAACTTGTGGCTGGGAATATAGAAGCCTCGTTATCAGATAAGCCCTTAATTACTCAGGTGAAATGGTGA 915 0.4536 MAEEEKVEGLQQLKHENQDLPQVLVLGSPTCLQTLKQLYSHKFRFLIPNTSLDSLYPLTAPLSSISAVICSASFSLTAPVLRLLPSLRLVVTTSAGTDHIDLNECGCRGIQVAGAGKLFSEEVADMAVGLKISGKRIGIVGLGSIGMEVAKRLECFGCTILYHSKHKKSAVSYPFYNSVIDLAATSNALVLCCALNEETRHIVNREVMLALGKEGFIVNVGRGSLIDEKQLVKFLMDGEIGGAALDVFEDEPNVPKELLSMDNVVLTPHCAAFTSECIIKLCELVAGNIEASLSDKPLITQVKW 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02728 304 CDD HPPR 21 291 - -
Aip02g02728 304 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 62 302 IPR006139 GO:0016616|GO:0051287
Aip02g02728 304 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 137 164 IPR029752 -
Aip02g02728 304 Gene3D - 110 273 - -
Aip02g02728 304 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 42 137 - -
Aip02g02728 304 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 18 302 - -
Aip02g02728 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 272 IPR036291 -
Aip02g02728 304 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 127 271 IPR006140 GO:0051287
Aip02g02728 304 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 18 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02728 Aip-Chr2 102944251 102945431 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02728 - K15919 gmx:100776772 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02728 02 102944251 102945431 Aip02g02728 02 102944251 102945431 ECH