Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02727 ATGCCTTTAAGGGAAAGACGGTTCTGGGAAGTGACGACACAAGGAGGGGTACCGATGCTAGGGGGTGATCGTCGAAACTCTCCTATTAAGGGTGGGGATCATATAGTGGAGGGAAGGGGTGATTGTGGGTTGACTCTTGCTTGGAACAGTGGCTGCTTGGATGGTCCGCAACGATTGGAGAATGAGACTGACTCTCTACGGAGGTGCTGGCCGAAGGATAAGGAGGGCCTGGGGGGGAACGGGGAATACCATACGCGGGGTTTTGTGATGAAGGCTGGGCTAGGAGGTCATCCGAATCCCATAATCGGAGTTGGGTGCGATTATGGGGACGGTGCTGGCACTGATGATGGTAGGTGTAGCCATGGACAGCTGAAGAGTTGGGATGCCTCGGCGGAGATGATGACGTTGCCGGTAAGAGAGGAGGAACAGAGGAACGGTATAGTAGTAATCTACACAGAAGATTTAAATGAATGGAGTAACAAACATTTGAATTTAAAACAGGGAAGGACTAAGATTAAGGAATCCGATCCCAATATGACGAGGGCTGGATTTGCGGGATCGTTGGTGCATGAAGTGGATGAGGACTCGGAGAGGACTCTGGCCTGGGACGTGGCTAATGGTGAAGGGGTTGCAGGTGATGTCACTAGTACTAGAAGGTGGGTGGGTCCTAGTAACTATGCTGTTCACAATAATGCGATGGCCCAAAGTTTATTGGTTAATAATAAGGAAATTCATTTGGGCCTCAAAAAGGGCAGCCCACATGTTCAGGATGATGGGCAGGTAGAGGTGGATCAGGCTGAATTGACCATGGAGAGGAGGCCGGTTCGGGTCGGGCCTGGAGATGGGTTATCGTCCAGAAAGAGGATTGATGAGGCTGAGATCGTCCAAGGCGGCGCAGACGTCAGCGATTGCAGGGAGAGGTCGGCAGATGGGGCCGAGCTCGGTTGGGGGAGAGGGGTTAACCCCGTCGGCGCAGAGGTTGGTTTCCGGTCTGACACCCGGATGCTATCCAAGGAAGAGGTTTCGCTAACCTCTTGTCATGGCGGCGATGGGAGGCTGGATCGGGGTATGGCGGGCGGCTTGGCGACTTATGGGGGAAAGGCGATGCAGGTGGCGATGGTTGGTAGGGATAGCCAGGTTGGTACTCTTGTTGTTACGGGGACATGCTTCAATGAAGAAACGGGATGGAAGCTTGGGACGGGTGGTGGGGTGGTTCTGCGCGGGGAAGGTAGTCAGGAAAGGGGTGATCGGTTGGGGGTTGATGACGATGGTAGGGCTGAAGCTTCGCGCCAAACAGAATGCGTATATGTTGCCGATCGGGTGGAAGACGGTAGTGGCAGTGTAAAGAAGATGGGAGTAACTAAGGAGCGAAGCTATGAGGATTGTTGCCAGGACCAAACCTGTTTGGCCAAGAATAAAGTGGAATTTACCTCGATAGCAGCTGAAGCACACGGGCTGATGAAGCCATTAATGGAGGAGATCGTGGGGTTTGGGGAAGATTTAGCTGGCTCGGGGGATGAACATACTGAGGTTGGGAGTGACGCTGGCTCTGAAGCGTCCGAAGTTGAGCGAACGAAGGCAATGCAAgaaaacaagaagacgtgggacctggctgtggaatctggagctgtgttatacgatgaggaggaggatataatggcgatactccaagctcagaatgaggaaatagcactgaagaaaaagcaggcaaaacggaaagagaaagctagaaggagtcgtccgaaaaacaggaaaaagCCGCCACCTCCGCCGCAGCTGCAGCAACAACAATCTCCGGCAGCACTGGATCCCGCCGTCGCATTAATGGGTCCCACAATTCCATTTGTACCCCCGTCCCCGTGGCAATCCAACGGTCACGATCACCCCATCCCTCAGCTCCATCACCATCACCATCATCAACAACAACAGAACCATCTTCAGCTTCCTTGGCCCCACTCTCTCTCTTACCCGCAAAATCTCTTCGGGTTGACTCATAATCCGTTTGCCCCTCCTCCTGGTGTACCCCAAACCCAAACCCTAACCCCAATTCCCAACTCCAACATTGGAATCGACGATCTCAGAAGATTAGGGTTTCCAGTCGAAACGGTCGCTACTACTACAAATCTAAGCAATAACAGCAACATTAGAGTTGATGCTTTTGTTCAGCAGCAGAAGCAGCAGGAGCTGAAGCTAAAGTTTGGGTCCTTGCCTAATGACGCTTTTGCTCATGAAGTTCCACCTAATGGGGCGGTGGATTCGTTGCTGTACTTGAAGCTGAACAATGGGAACTTGAACTTCCATGTTGAACCGCATAAACAAGGTCCAAAATTTTCAAATTCTGCTGGGAATTTTGATGTTGTTGAACAAGATAGGAGAGGGGTTGAGAGGGGGAATAACAACAACCACATCAATATTAATAACAATAGTTTTCATGGTGGTGGAGGGAATCTTAGGTCTGAGACTAGTAGGGCTCCACCGCCAGGGTTTGGGAACAAGCAAAGGGGAAAGGGTCATTGGGGCTCTGGGGGGAGAAGGAAGGGTTCAGAGGTTGATGATGATCGAGCGATGCCTGTTGATTCTGGGGGATTGGGTGGTAGGATTGAGAGTGTGCACCCTAGGAAGGAAAATTTCAGGATGGTGTCTGGGGGAAGAAGTGGTGGCAGAGGCAATGTGGGTCGCGAGATGGGGATTCTCGAACAGCTTGATCACCCAGGGCCGCCGGCGGGGAGTAAACTTCATTCAGTGTCTGGTGCTGATGTTGAAGAATCTTTGGCGAAGCTTCAAATTGGTGATGCTGCTGATGATGATGGTGATGGTGATCTTGATGCTGATGCCCTTGGGGAGCAGCTAGGTGATTCCTTGTTGGTTGGGGATGAGTCTGAAGACAAGAATAACTCAAGGCAACGCCGTGCTCGGGAGAAGGATGCCAGATCATTAGATTCGAGAGGACAACGGTTACTAAGCCAGCGGCAAAGAATGTACAAAAGGCAGACGATATGTCGAAGGGACATAGATAATCTTAACGTTCCTTTTCTTGCAATATATGAGTCTCTGATTCCTCCAGAGGAAGAAAAGGTGAAGCAAACACAACTATTAGCGTTATTGAAGAAATTAGTTAGCAAAGAGTGGCCAGAAGCTCAACTTTATATTTATGGATCATGTGCTAATTCATTTGGCGTTTCTAAAAGTGATATTGATATTTGCCTTGCAATTGAGGAAGCAAACATGGAGAAATCCGATATTCTAATGAAATTGGCAGATATTTTACAATCAGATAATCTGCAGAATGTGCAGGCTTTGACTCGGGCAAGAGTTCCTATAGTAAAACTCATGGATCCAGCGACAGGAATTTCTTGTGACATATGCATCAACAACCTCCTTGCTGTTGTAAATACAAAGCTTCTTTGGGATTATGCTCAAATAGATGCAAGATTAAGGCAGTTGGCATTTATTATCAAACATTGGGCAAAGTCAAGAGGAGTGAATGAAACTTATCATGGAACCTTATCTAGCTATGCGTATGTCTTAATGTGCATTCATTTTTTGCAACAACGAAGGCCTGCTATCCTTCCTTGCTTACAGGAGATGGAATCGACGTACTCTGTTAAGGTGGACAATGTGAATTGTGCTTACTTTGATAAAGTTCGGACACTCGCTGATTTTGGACGCCCCAACAAGGAAACAATAGCTCAGTTAGTGTGGGGATTTTTCTATTATTGGGCCTACTGTCATGATTACGCAAATTCAGTTATATCTGTACGTACAGGAAGCATAATCAGTAAGCGAGAGAAGGACTGGACGAGGTGGGTTGGGAATGATCGGCATCTGATATGCATAGAGGATCCTTTTGAGATATCTCATGATCTGGGCAGAGTGGTGGATAAACGCAGTATCAAGGTTCTGAGGGAAGAGTTTGAACGTGCTGCTGATATAATGCAGTATGATCCAAATCCATGTGTTAAACTTTTTGAGCCCTATGTTCCTTCTTGA 3990 0.4657 MPLRERRFWEVTTQGGVPMLGGDRRNSPIKGGDHIVEGRGDCGLTLAWNSGCLDGPQRLENETDSLRRCWPKDKEGLGGNGEYHTRGFVMKAGLGGHPNPIIGVGCDYGDGAGTDDGRCSHGQLKSWDASAEMMTLPVREEEQRNGIVVIYTEDLNEWSNKHLNLKQGRTKIKESDPNMTRAGFAGSLVHEVDEDSERTLAWDVANGEGVAGDVTSTRRWVGPSNYAVHNNAMAQSLLVNNKEIHLGLKKGSPHVQDDGQVEVDQAELTMERRPVRVGPGDGLSSRKRIDEAEIVQGGADVSDCRERSADGAELGWGRGVNPVGAEVGFRSDTRMLSKEEVSLTSCHGGDGRLDRGMAGGLATYGGKAMQVAMVGRDSQVGTLVVTGTCFNEETGWKLGTGGGVVLRGEGSQERGDRLGVDDDGRAEASRQTECVYVADRVEDGSGSVKKMGVTKERSYEDCCQDQTCLAKNKVEFTSIAAEAHGLMKPLMEEIVGFGEDLAGSGDEHTEVGSDAGSEASEVERTKAMQENKKTWDLAVESGAVLYDEEEDIMAILQAQNEEIALKKKQAKRKEKARRSRPKNRKKPPPPPQLQQQQSPAALDPAVALMGPTIPFVPPSPWQSNGHDHPIPQLHHHHHHQQQQNHLQLPWPHSLSYPQNLFGLTHNPFAPPPGVPQTQTLTPIPNSNIGIDDLRRLGFPVETVATTTNLSNNSNIRVDAFVQQQKQQELKLKFGSLPNDAFAHEVPPNGAVDSLLYLKLNNGNLNFHVEPHKQGPKFSNSAGNFDVVEQDRRGVERGNNNNHININNNSFHGGGGNLRSETSRAPPPGFGNKQRGKGHWGSGGRRKGSEVDDDRAMPVDSGGLGGRIESVHPRKENFRMVSGGRSGGRGNVGREMGILEQLDHPGPPAGSKLHSVSGADVEESLAKLQIGDAADDDGDGDLDADALGEQLGDSLLVGDESEDKNNSRQRRAREKDARSLDSRGQRLLSQRQRMYKRQTICRRDIDNLNVPFLAIYESLIPPEEEKVKQTQLLALLKKLVSKEWPEAQLYIYGSCANSFGVSKSDIDICLAIEEANMEKSDILMKLADILQSDNLQNVQALTRARVPIVKLMDPATGISCDICINNLLAVVNTKLLWDYAQIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQQRRPAILPCLQEMESTYSVKVDNVNCAYFDKVRTLADFGRPNKETIAQLVWGFFYYWAYCHDYANSVISVRTGSIISKREKDWTRWVGNDRHLICIEDPFEISHDLGRVVDKRSIKVLREEFERAADIMQYDPNPCVKLFEPYVPS 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02727 1329 MobiDBLite consensus disorder prediction 951 983 - -
Aip02g02727 1329 Gene3D Beta Polymerase, domain 2 1028 1141 IPR043519 -
Aip02g02727 1329 MobiDBLite consensus disorder prediction 956 981 - -
Aip02g02727 1329 MobiDBLite consensus disorder prediction 570 585 - -
Aip02g02727 1329 SUPERFAMILY PAP/OAS1 substrate-binding domain 1144 1313 - -
Aip02g02727 1329 MobiDBLite consensus disorder prediction 798 816 - -
Aip02g02727 1329 Pfam TUTase nucleotidyltransferase domain 1026 1121 IPR045100 GO:0016779
Aip02g02727 1329 Gene3D - 1142 1310 - -
Aip02g02727 1329 CDD NT_PAP_TUTase 1030 1139 - -
Aip02g02727 1329 PANTHER POLY A POLYMERASE CID PAP -RELATED 636 1328 - -
Aip02g02727 1329 Pfam Cid1 family poly A polymerase 1229 1287 IPR002058 -
Aip02g02727 1329 Coils Coil 546 578 - -
Aip02g02727 1329 MobiDBLite consensus disorder prediction 796 868 - -
Aip02g02727 1329 MobiDBLite consensus disorder prediction 842 856 - -
Aip02g02727 1329 SUPERFAMILY Nucleotidyltransferase 1004 1140 IPR043519 -
Aip02g02727 1329 MobiDBLite consensus disorder prediction 566 646 - -
Aip02g02727 1329 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 636 1328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02727 Aip-Chr2 102931904 102943723 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02727 - - adu:107475742 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02727 02 102931904 102943723 Aip02g02727 02 102931904 102943723 ECH