Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02621 ATGTCGCACATAGACAGCGCTCCTTCGACGCCAGGCAAGGTCAAGATGGAGAAATCATCGTACTTCTTCACGCGCGGAGGCGGCGCGCGGACCCACGTCTCGTCGGCGCTGAAGCGCCGGGGAGATGGGGTCCTCGGCATTGACAATTTCAATGACTACTATGACCCTTCTTTGAAGCGTGCGCGGCAAGCTTTGTTGGAGCGCACTGGTGTGTTCATTGTGGAAGGTGACATCAATGATGAAGCTTTGCTGAGGAAGCTCTTTGAGGTTGTTCCATTCACACATGTTATGCATTTGGCTGCTCAAGCTGGTGTGAGGTATGCTATGGAGAACCCTGGCTCTTATGTGCATAGTAACATTGCTGGTTTTGTTAATTTGCTTGAGGTTTGTAAGAGTGTGAATCCACAACCTGCTATAGTTTGGGCTTCTAGTAGCTCAGTTTATGGGTTGAACACTAAGGTGCCATTTAGTGAGAAGGATAGGACTGATCAGCCTGCTAGTTTGTATGCTGCGACAAAGAAGGCCGGTGAGGAGATTGCACACACCTATAATCATATATACGGGCTATCGTTGACTGGGTTGAGGTTCTTTACGGTTTATGGTCCGTGGGGTAGACCTGACATGGCCTACTTCTTCTTCACTAAGGATATATTGAAGGGGAAGCAGATAGCGATCTTTGAGGCCGCAAATCATGGGACGGTTGCAAGGGATTTCACATACATAGATGATATTGTGAAGGGTTGTTTGGGGGCGTTGGATACTGCCGAGAAGAGCACCGGGAGTGGGGGGAAGAAGAGAGGGCCGGCGCAGCTGAGGGTGTTCAATTTGGGGAATACTTCACCTGTGCCTGTTAGTGAACTTGTGAGCATTTTGGAGAGGCTGTTGAAGGTTAAGGCAAAGAGGAACATCATGAAGTTGCCGCGGAATGGGGATGTGCAGTATACCCATGCGAATATTAGCTACGCGCAGAGGGAGCTTGGGTATAAGCCTACGACGGATCTGCAGACTGGCTTGAAGAAATTTGTTCGGTGGTACCTGAATTACTATTCTGATGGGAAAAAAGCTGTTGAGTGA 1074 0.4907 MSHIDSAPSTPGKVKMEKSSYFFTRGGGARTHVSSALKRRGDGVLGIDNFNDYYDPSLKRARQALLERTGVFIVEGDINDEALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKQIAIFEAANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSELVSILERLLKVKAKRNIMKLPRNGDVQYTHANISYAQRELGYKPTTDLQTGLKKFVRWYLNYYSDGKKAVE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02621 357 Gene3D - 197 345 - -
Aip02g02621 357 PANTHER EPIMERASE-RELATED 29 355 - -
Aip02g02621 357 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 29 355 - -
Aip02g02621 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 349 IPR036291 -
Aip02g02621 357 Gene3D - 32 332 - -
Aip02g02621 357 Pfam GDP-mannose 4,6 dehydratase 32 340 IPR016040 -
Aip02g02621 357 PRINTS Nucleotide sugar epimerase signature 236 251 - -
Aip02g02621 357 PRINTS Nucleotide sugar epimerase signature 46 62 - -
Aip02g02621 357 PRINTS Nucleotide sugar epimerase signature 271 286 - -
Aip02g02621 357 PRINTS Nucleotide sugar epimerase signature 311 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02621 Aip-Chr2 101109928 101111851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02621 31 355 Miscellaneous Gene Families AT4G00110 92.923 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02621 K08679 - gmx:100788739 637.106