Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02620 ATGGCCCAAGTGACCAGAATCCACAATGGTCCTCAAAACACACAGATTCTTCTTCGCCATACTCACAATTCCCACATACCCAAATCAGCAAACTCAGTTTCATTGAAGTCACAACTTTGGGGCACCTCAAAATCTGTGAGCTTGAATCACAAAAATGGTGTCTTTTTGGGAAATTTTGAGGTGGGTAGGTGCAATAATAATGTGGTTAGGGTTTCTGCATCTGTTGCCGCTACAGAGAAGCCTTCGACGGCGCCGGAGATCGTTCTGGAACCTATCAAAGAAATCTCCGGAACCATCACATTGCCTGGCTCGAAGTCTCTGTCCAATCGAATTTTGCTTCTTGCTGCTCTCTCTGAGGGAACAACTGTTGTGGACAACTTGTTGAATAGCGAGGATGTTCATTACATGCTCGGTGCATTAAGGACCCTTGGACTACGAGTGGAAGATGACAAAAATGCCAAACAAGCAATCGTGGAAGGCTGTGGGGGGTTGTTTCCCACTGGTCGAGAGTCTAAAGAGGAAGTTACTTTATTCCTTGGAAATGCTGGTACTGCAATGCGTCCTTTGACAGCAGCTGTGACTGCTGCAGGTGGAAACACAAGCTATGTACTTGATGGGGTGCCCCGAATGAGAGAGAGGCCTATTGGAGATTTGGTGGCTGGTCTCAAGCAGCTTGGTGCAGATGTTGATTGTTCCCTTGGCACAAACTGTCCACCTGTTCGTGTAGTTGGGAAGGGAGGACTTCCTGGGGGAAAGGTGAAGTTGTCTGGATCAATTAGCAGTCAATACTTGACTGCATTGCTCATGGCAGCTCCTTTGGCCCTTGGTGATGTTGAAATTGAGATTATCGATAAACTGATTTCTGTTCCCTACGTTGATATGACTTTGAAACTGATGGAGCGCTTTGGAGTCCATGTGGAGCACAGCGGTAACTGGGATAGGTTCTTGGTCCACGGAGGTCAAAAGTACAAGTCTCCTGGGAATGCTTTTGTTGAAGGCGATGCTTCTAGTGCCAGCTACTTCCTTGCAGGTGCAGCTGTTACCGGTGGGACTATCACAGTTGTAGGCTGCGGCACAAGTAGTTTACAGGGAGATGTAAAATTTGCTGAAGTTCTCGAAAAGATGGGAGCTAAAGTTACATGGACAGAGAACAGTGTCACCGTTACTGGCCCACCACGAGATCCTTCAGGCCGAAAAGTCTTGCAAGGCGTTGATGTCAATATGAACAAGATGCCAGATGTTGCCATGACTCTTGCTGTTGTTGCGCTATTTGCTAATGGCCCCACTGCCATAAGAGATGTGGCTAGTTGGAGAGTTAAGGAGACAGAGAGAATGATAGCAATTTGCACAGAACTTAGGAAGCTAGGAGCAACAGTTGAAGAAGGTCCTGATTACTGTGTGATAACGCCACCCGAGAAATTGAACATCACGGCGATCGACACGTACGATGACCACAGAATGGCCATGGCATTTTCTCTTGCTGCGTGTGGCGATGTTCCGGTAACCATCAATGATCCTGGTTGCACCCGGAAAACATTCCCTGATTACTTTGAAGTTCTTGCAAAGTACACCAAGCAATAA 1581 0.4706 MAQVTRIHNGPQNTQILLRHTHNSHIPKSANSVSLKSQLWGTSKSVSLNHKNGVFLGNFEVGRCNNNVVRVSASVAATEKPSTAPEIVLEPIKEISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLGALRTLGLRVEDDKNAKQAIVEGCGGLFPTGRESKEEVTLFLGNAGTAMRPLTAAVTAAGGNTSYVLDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVRVVGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVDMTLKLMERFGVHVEHSGNWDRFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVVGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPSGRKVLQGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNITAIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFEVLAKYTKQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02620 526 PANTHER AROM/DEHYDROQUINATE SYNTHASE 2 525 - -
Aip02g02620 526 SUPERFAMILY EPT/RTPC-like 87 522 IPR013792 GO:0003824
Aip02g02620 526 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 2 525 - -
Aip02g02620 526 CDD EPSP_synthase 95 522 IPR006264 GO:0003866|GO:0009073
Aip02g02620 526 ProSitePatterns EPSP synthase signature 1. 177 191 IPR023193 -
Aip02g02620 526 Gene3D Enolpyruvate transferase domain 321 523 IPR036968 GO:0016765
Aip02g02620 526 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 90 520 IPR001986 GO:0016765
Aip02g02620 526 TIGRFAM aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 97 525 IPR006264 GO:0003866|GO:0009073
Aip02g02620 526 Gene3D Enolpyruvate transferase domain 103 315 IPR036968 GO:0016765
Aip02g02620 526 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 93 526 IPR006264 GO:0003866|GO:0009073
Aip02g02620 526 ProSitePatterns EPSP synthase signature 2. 438 456 IPR023193 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02620 Aip-Chr2 101092758 101097176 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02620 K00800 - gmx:100789268 868.611