Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02611 ATGTTTTCTACATTCTTCCAGCCTCCATTACGACCCTTAGTTTTAGGTGGCGATCACTCAATATCATATCCAGTTGTTCGAGCCGTCTCTGAAAAACTTGGAGGACCAGTTGATATTCTTCATCTTGATGCACATCCTGATATCTATCATTGTTTTGAAGGAAACAAGTATTCACATGCTTCGTCTTTTGCTCGAATCATGGAGGGTGGTTATGCCAGGCGACTATTGCAGGTTGGTATAAGATCAATAACAACAGAAGGGCGCGAACAAGGCAACAAATTCGGGGTTGAGCAATATGAAATGCGAACATTTTCAAGAGATCGTGAATATTTAGAAAACCTGAAACTTGGTGAAGGTGTGAAAGGTGTATATGTCTCAATAGATGTGGATTGTCTTGATCCTGCTTTTGCTCCTGGAGTGTCTCACATCGAACCGGGAGGTCTCTCTTTCCGCGATGTTCTCAACATCCTACACAACCTTCAAGGCGACATTGTTGCCGCAGACGTGGTTGAATTCAATCCGCAACGTGATACAGTTGACGGTATGACTGCCATGGTAGCCGCAAATCGACCTGAGTTATCCCGAATCACTACTGTAGTTGCTCCCTCCACCGTCGATAGTCTATACGCAGCATCTACGTTGGCCTTCAGCCAGTTCTCCGGTGGAGTAATCAGTAGAACCAGAAGCAGACAAGCAGTGCCAATGGCTTCTCCATCGGCATTTTCGCGCCTTAACCTTCTCCTCCCAAAACCTTCTCTTTTTGCCGCCAATTTCCGCAGAACCCAATTCCAATTCTTCCCCACTCTTTCTTCCCGAACCATCTTCTCCTCCTCCTCCTCCCTAACATGCTCTTCTTATTCTAATTCTTCCATAAAGGAGCTCCAAAACCCAACCCCAAAACGCGACAACCACTTTGTCGTTTTGGGCATTGAAACCAGCTGCGACGATACTGCCGCCGCCGTTGTGAGAAGCAACGGTGAAATTCTGAGTCAAGTGGTGTCTTCTCAGGCAGATCTGCTAGCGAAATATGGAGGTGTCGCTCCAAAAATGGCAGAAGAGGCTCACTCGCAGGTTATTGACCAGGTTGTGCAAGAAGCTCTTGATAAAGCTTACATGACTGAGAAGGATCTTACTGCAGTTGCTGTTACTATTGGTCCTGGTTTAAGTCTTTGCCTTCGTGTTGGAGTGCAGAAGGCTCGACAAATTGCTGGGTCCTTTAAGTTACCAATTATTGGCATACATCACATGGAAGCACATGCTCTAGTAGCCAGGTTAACCGAGAAAGATTTACAGTTTCCTTTCATAGCCCTACTAATATCAGGGGGACATAATCTACTCATTCTAGCTCGTGATCTTGGGCAATATGTACAACTTGGAACAACAATAGATGATGCAATTGGTGAAGCATATGACAAGACAGCCAAATGGCTTGGACTTGATTTGAGGAGAAGTGGTGGTCCTGCTATAGAGGAGCTTGCTAAGGAGGGGAATGCCAAATCAGTAAACTTTTCAGTTCCAATGAAGCAGCACAAAGATTGCAACTTCTCCTATGCTGGTCTAAAAACCCAAGTAAGGTTGGCAATCGAATCCAAAAAGATTGATGCCAAGATCCCTATTTCTTCTGCAAGTAAAGAAGATCGATTGGCCCGGGCTGATATTGCTGCTGCTTTTCAGCGAATTGCAGTGTTACATCTTGAGGAAAGGTGTGAACGTGCGATCCAGTGGGGATTGAAGATGGAGCCTTCTATAAGACACCTGGTAATTATCTCTGGTGGCGTTGCATCAAATTATTATGTTCGATCTCGGCTTGATATGGTTGTGAAGAAGAATGGCTTGCAACTTGTATGCCCTCCTCCCCGGCTTTGTACTGACAATGGTGTAATGGTAGCTTGGACTGGCATTGAGCACTTCCGCATGGGAAGATATGACCCTCCTCCACCTGCAGAAGAACCTGAAAACTTTGTGTATGATTTGCGGCCGAGGTGGCCGCTGGGGGAAGAATATGCCGAAGGAAGAAGTGATGCACGCTCAATAAGAAGGGCTCGCCTTCATCCATCTCTTACGTCCATAATTCAAGCATCATCACAGCAGTGA 2094 0.4575 MFSTFFQPPLRPLVLGGDHSISYPVVRAVSEKLGGPVDILHLDAHPDIYHCFEGNKYSHASSFARIMEGGYARRLLQVGIRSITTEGREQGNKFGVEQYEMRTFSRDREYLENLKLGEGVKGVYVSIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDIVAADVVEFNPQRDTVDGMTAMVAANRPELSRITTVVAPSTVDSLYAASTLAFSQFSGGVISRTRSRQAVPMASPSAFSRLNLLLPKPSLFAANFRRTQFQFFPTLSSRTIFSSSSSLTCSSYSNSSIKELQNPTPKRDNHFVVLGIETSCDDTAAAVVRSNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSQVIDQVVQEALDKAYMTEKDLTAVAVTIGPGLSLCLRVGVQKARQIAGSFKLPIIGIHHMEAHALVARLTEKDLQFPFIALLISGGHNLLILARDLGQYVQLGTTIDDAIGEAYDKTAKWLGLDLRRSGGPAIEELAKEGNAKSVNFSVPMKQHKDCNFSYAGLKTQVRLAIESKKIDAKIPISSASKEDRLARADIAAAFQRIAVLHLEERCERAIQWGLKMEPSIRHLVIISGGVASNYYVRSRLDMVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRMGRYDPPPPAEEPENFVYDLRPRWPLGEEYAEGRSDARSIRRARLHPSLTSIIQASSQQ 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02611 697 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 307 637 IPR022450 GO:0002949
Aip02g02611 697 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 305 664 IPR022450 GO:0002949
Aip02g02611 697 Pfam Arginase family 11 189 IPR006035 GO:0046872
Aip02g02611 697 ProSitePatterns Arginase family signature. 126 147 IPR020855 GO:0016813|GO:0046872
Aip02g02611 697 SUPERFAMILY Arginase/deacetylase 6 189 IPR023696 -
Aip02g02611 697 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 308 630 IPR017861 -
Aip02g02611 697 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 327 631 IPR000905 -
Aip02g02611 697 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 302 676 IPR000905 -
Aip02g02611 697 SUPERFAMILY Actin-like ATPase domain 307 631 IPR043129 -
Aip02g02611 697 Gene3D - 307 639 - -
Aip02g02611 697 Gene3D Ureohydrolase domain 2 191 - -
Aip02g02611 697 Gene3D - 433 617 - -
Aip02g02611 697 ProSiteProfiles Arginase family profile. 1 189 IPR006035 GO:0046872
Aip02g02611 697 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 302 676 IPR022450 GO:0002949
Aip02g02611 697 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 458 479 IPR017861 -
Aip02g02611 697 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 435 447 IPR017861 -
Aip02g02611 697 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 587 596 IPR017861 -
Aip02g02611 697 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 380 400 IPR017861 -
Aip02g02611 697 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 308 321 IPR017861 -
Aip02g02611 697 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 401 420 IPR017861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02611 Aip-Chr2 100945257 100953178 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02611 K01409 - gmx:100784367 728.783