Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02604 ATGGCTGGTGAATCTGATGTCTCTGAAAATGCACTTTCTTGTGCTAACTGTGGAAAACCCGCAAATCTTCAGTGTCCAAAGTGCATTGAATTGAAGCTTCCTCGTGAAGGTTCTGCTTTCTGCTCCCAGGATTGTTTCAAGTCTTCGTGGAGCTCGCACAAGTCGGTGCATGTGAAGGCGAAGCTATCCTCACCTGGCATGGGCACTCCAGGTGAGCAGGACTCAAGCTCACCTGGTGAAAGTTGGTTATACTGCTTGAAGAGAGGGCAGTCACGAACTCCAAAGATGCCTCACTTTGATTGGACTGGGACGTTGCGGCCATATCCCATATCTGTTAAACGCATTGTTCCAGCTAATATTGATAAACCAGACTGGGCAGATGATGGAATTCCCAAAATTGAGCCTAATAGTGACTTCCAGCATACTGTTGAGATTAAATCTCCAGATCTAATTGCGAAAATGAGAGAAACATGTCGGATTGCAAGGGAGGTTTTGGATGCGGCTGCTCGTATTGTTCGGCCTGGTGTGACAACTGATGAGATTGACAAAGTTGTTCACGACACAACTATTGCTGCAGGAGGATATCCATCACCTCTCAATTATCATTTCTTCCCTAAATCTTGCTGCACGTCAGTTAATGAAGTAATCTGTCATGGAATTCCTGATGCAAGGAAGCTTGAAGATGGAGACATTGTAAATATTGATGTCACTGTGTACTATAAAGGTGTACATGGTGATCTCAACGAAACGTACTTCGTGGGAAATGTTGATGAAGACTCTCAGAAGCTGGTCAAATGCACATATGAGTGCCTTGAAAAGGCAATAGCTATTGTAAAACCCGGAGTACGATTCCGGGAAATTGGTGAAGTTATCAACCGTCATGCAACTATGTCAGGCTTTTCAGTGGTAAAATCATACTGTGGTCATGGAATTGGAGAGCTCTTTCATTGTGCACCAAACATTCCTCATTATGGAAGAAATAAAGCAGTTGGTATAATGAAGGCTGGACAAACCTTCACAATTGAACCAATGATCAACGCAGGTATCTGGCGTGATCGAATGTGGCCAGATGGATGGACTGCTGTCACCGCAGATGGTAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACAGACACTGGTGTTGAGGTCCTAACAGGGAGGTTGCAGACATCACCCAATGTTTTTCCATGGTTAAAATCATGA 1209 0.4417 MAGESDVSENALSCANCGKPANLQCPKCIELKLPREGSAFCSQDCFKSSWSSHKSVHVKAKLSSPGMGTPGEQDSSSPGESWLYCLKRGQSRTPKMPHFDWTGTLRPYPISVKRIVPANIDKPDWADDGIPKIEPNSDFQHTVEIKSPDLIAKMRETCRIAREVLDAAARIVRPGVTTDEIDKVVHDTTIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNVDEDSQKLVKCTYECLEKAIAIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYGRNKAVGIMKAGQTFTIEPMINAGIWRDRMWPDGWTAVTADGKRSAQFEHTLLVTDTGVEVLTGRLQTSPNVFPWLKS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02604 402 PANTHER METHIONINE AMINOPEPTIDASE 1 12 395 - -
Aip02g02604 402 PRINTS Methionine aminopeptidase-1 signature 208 221 IPR001714 -
Aip02g02604 402 PRINTS Methionine aminopeptidase-1 signature 230 246 IPR001714 -
Aip02g02604 402 PRINTS Methionine aminopeptidase-1 signature 300 312 IPR001714 -
Aip02g02604 402 PRINTS Methionine aminopeptidase-1 signature 331 343 IPR001714 -
Aip02g02604 402 CDD MetAP1 151 387 IPR002467 GO:0006508|GO:0070006
Aip02g02604 402 Hamap Methionine aminopeptidase [map]. 143 389 IPR002467 GO:0006508|GO:0070006
Aip02g02604 402 Pfam Metallopeptidase family M24 153 380 IPR000994 -
Aip02g02604 402 Pfam zf-MYND-like zinc finger, mRNA-binding 15 58 IPR031615 -
Aip02g02604 402 SUPERFAMILY Creatinase/aminopeptidase 99 388 IPR036005 -
Aip02g02604 402 Gene3D Creatinase/methionine aminopeptidase superfamily 99 398 IPR036005 -
Aip02g02604 402 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 306 324 IPR002467 GO:0006508|GO:0070006
Aip02g02604 402 SUPERFAMILY HIT/MYND zinc finger-like 12 55 - -
Aip02g02604 402 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 144 388 IPR002467 GO:0006508|GO:0070006
Aip02g02604 402 Gene3D - 3 61 - -
Aip02g02604 402 PANTHER METHIONINE AMINOPEPTIDASE 12 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02604 Aip-Chr2 100885752 100891100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02604 K01265 - gmx:100813779 739.954