Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02577 ATGAGATTCAAGCTCGGGAAGCGTGCACTTCGGGTCACCCGCTGGGTCTTCAGACGGATCAGGATCCGACCCGTGTACCGACGGTTGGATGGATCATCAGGGAAGCCCATGTCAAAGCTTCTCAATTGGGGCCGCAAGTTGACTAGTGGGGCGAAGTTATTATGGCAAAAGGACGGTGGCGAGTTCCGGCGCGTGCTTGTGCCGGTGGTTTACTTCAACCATCCCTTATTTGGAGAGTTGCTTCGCGAGTCGGAGGCCGAGTTCGGATACCACCACCCGGGCGGGATCACGATACCTTGCCGGGTCACTGAGTTTGAACAAGTCAAGACCCGGATTGCATCCGGATCGGCTTGTAAGAGGCTGACGTGGCTGCGGCATCATTAA 384 0.5625 MRFKLGKRALRVTRWVFRRIRIRPVYRRLDGSSGKPMSKLLNWGRKLTSGAKLLWQKDGGEFRRVLVPVVYFNHPLFGELLRESEAEFGYHHPGGITIPCRVTEFEQVKTRIASGSACKRLTWLRHH 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02577 127 Pfam Auxin responsive protein 61 109 IPR003676 GO:0009733
Aip02g02577 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 57 IPR003676 GO:0009733
Aip02g02577 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 58 126 IPR003676 GO:0009733
Aip02g02577 127 PANTHER SMALL AUXIN-UP RNA-RELATED 2 57 - -
Aip02g02577 127 PANTHER SMALL AUXIN-UP RNA-RELATED 58 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02577 Aip-Chr2 100588339 100588812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02577 59 105 Calmodulin-binding Proteins AT3G43120 44.681 2.19e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02577 K14488 - mnt:21403743 157.918