Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02550 ATGTCAAGACGCGATGTACCTGATTCTGATCCAGATGACGATGGCTCAGCTTCAAGCTCCGGCGAGGAAGAGGAAGAGGCGGAAGAAACCACCGTTGCCGCGACCGCAAAGACGGTTTCGGAGTACGAGAAGCAGAGGCTATCGAGAATAGCGGAGAATAACGCAAAGCTGGAGGCACTAGAGAAGCTCAAAGAAGAAGAACTAGATGATCATGATGATGATGATGATGAGTATATCCCCGATGATGATGCAGAAGAACCAGTATCAGATTCTTCGGACGATAAAGATGAAGAATTTGTGATCGGAAATGCTTCTGGATCGCGCAAAAGGAAGGTGAAGGACAAAGGTTTAAAAATGAAAGCTAAAGTGTCTGGGAAGAAGCATTGTAATAGGAATTCAGAGTACGTTGATGGTGATGATGAAGATGAAGCTTTGAGGCAGGTAATTTTGATCGTTTTCGATAAACATTCCTCTTTCAAACATGTAGTGAAGAACATTACTAAGTCTGAGAAAAAGAGGAATATTCAAAATCAAGAGGATAAAGAAAGAAAGAAGAACAAGAAATCGTTTGCTAGTAGACTGCAAATGACTGAAGATGAACTCATTGTACACTTCTTCCAGCTTGATGAAGCAGGAAAAGGAACTGTATCAATGAGAGATCTACAAAGAGCAGCCATAGCTCATGATTTCTCTTGGACTGACAAAGAATTGGTCGATATGATTCGTTGCTTTGATAGTGATGGAGATGGAAGGATAACCCTTGACGATTTCCGGAAGATTGCTGTTCGATGCAACTTGATTAGAGAGTCTTAA 813 0.4157 MSRRDVPDSDPDDDGSASSSGEEEEEAEETTVAATAKTVSEYEKQRLSRIAENNAKLEALEKLKEEELDDHDDDDDEYIPDDDAEEPVSDSSDDKDEEFVIGNASGSRKRKVKDKGLKMKAKVSGKKHCNRNSEYVDGDDEDEALRQVILIVFDKHSSFKHVVKNITKSEKKRNIQNQEDKERKKNKKSFASRLQMTEDELIVHFFQLDEAGKGTVSMRDLQRAAIAHDFSWTDKELVDMIRCFDSDGDGRITLDDFRKIAVRCNLIRES 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02550 270 MobiDBLite consensus disorder prediction 1 40 - -
Aip02g02550 270 Pfam EF-hand domain pair 200 260 IPR002048 GO:0005509
Aip02g02550 270 MobiDBLite consensus disorder prediction 67 93 - -
Aip02g02550 270 SUPERFAMILY EF-hand 190 265 IPR011992 -
Aip02g02550 270 MobiDBLite consensus disorder prediction 61 137 - -
Aip02g02550 270 Coils Coil 47 77 - -
Aip02g02550 270 MobiDBLite consensus disorder prediction 171 190 - -
Aip02g02550 270 Coils Coil 168 188 - -
Aip02g02550 270 MobiDBLite consensus disorder prediction 15 29 - -
Aip02g02550 270 SMART efh_1 236 264 IPR002048 GO:0005509
Aip02g02550 270 MobiDBLite consensus disorder prediction 94 110 - -
Aip02g02550 270 ProSiteProfiles EF-hand calcium-binding domain profile. 232 267 IPR002048 GO:0005509
Aip02g02550 270 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Aip02g02550 270 MobiDBLite consensus disorder prediction 111 126 - -
Aip02g02550 270 Gene3D - 155 267 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02550 35 270 EF-hand Containing Proteins AT1G73440 36.614 8.30e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02550 - - var:108347013 254.988