Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02549 ATGAGTTCCGGCGAGCTTCTCCACATACACCCCCAGGAGCTGCAGTTCCCCTTTGAATTGAGGAAGCAGATCTCTTGCTCTTTGCAGCTCTCTAACAAGACAGATAACTATGTGGCTTTCAAGGTTAAGACAACAAACCCAAAGAAGTACTGTGTAAGACCTAACACTGGAATTGTGTTGCCAAGGACTACGTGTGATATTATAGTGACAATGCAAGCCCAAAAGGAGGCACCACCTGATATGCAATGCAAAGATAAGTTTCTCCTTCAAAGCGTAGTTGCACCATCCGGAGCAACCCCAAAAGATATTACTCCAGAAATGTTCAATAAAGAATCTGGCCATGATGTAGAAGAGTGCAAATTGAGGGTTGTTTATGTTTCCCCTCCTCGACCACCGTCCCCTGTCCAAGAAGGTTCGGACGAAGAGTCCTCGCCTCGAGCATCTATTTCAGAAAATGGGCATTCAAGTGTTCCTGAATTTACAGCTGCTTCAAAAGCTTTCAATGAGCACGCCGAACAGGATGGTTCAATTGAGGCAAGGGCTCTTATTTCGAAGGTCACCGAGGAGAGGAATTCTATTATTGATCAAAATAAAAGACTTCAGCAAGAATTGGAACTTCTGAGGCGTTCTGCAAAGAGAGGTGGTGGTGGTATCCCATTTATATATGTAGTGCTTGTTGGCATTATTGGCATCATTTTGGGTTTCCTACTGAAGAGAACATGA 723 0.4412 MSSGELLHIHPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRTTCDIIVTMQAQKEAPPDMQCKDKFLLQSVVAPSGATPKDITPEMFNKESGHDVEECKLRVVYVSPPRPPSPVQEGSDEESSPRASISENGHSSVPEFTAASKAFNEHAEQDGSIEARALISKVTEERNSIIDQNKRLQQELELLRRSAKRGGGGIPFIYVVLVGIIGIILGFLLKRT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02549 240 Coils Coil 183 210 - -
Aip02g02549 240 SUPERFAMILY PapD-like 2 140 IPR008962 -
Aip02g02549 240 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Aip02g02549 240 MobiDBLite consensus disorder prediction 137 155 - -
Aip02g02549 240 MobiDBLite consensus disorder prediction 127 155 - -
Aip02g02549 240 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Aip02g02549 240 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 238 IPR016763 GO:0005789
Aip02g02549 240 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 238 - -
Aip02g02549 240 PIRSF VAMP_assoc_prot 1 239 IPR016763 GO:0005789
Aip02g02549 240 Gene3D Immunoglobulins 2 130 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02549 Aip-Chr2 99964047 99967818 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02549 - - gmx:100305725 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02549 02 99964047 99967818 Aip02g02549 02 99964047 99967818 ECH