Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip02g02533 | ATGGATTATTCTGCGTACCAACAACAACAGCAGCAGCAGCAGCAACAACAACAACAAGCATATTCATATGAGTATGATCCATCTCAAATCCAAGCTTACGATCAATCCTATGCGTATCAACAACCATATTATCCCTACACTCAACAATACGCGTATTATCCTGATCCAACTCAAGCTCACCTTCAATTCCAACCCGAATCCGCACCGGTTCACCCTCCCGGTGTCAATCCTGAACCGGCTCCTCAAAGACCCACGCACGCCCCGACTGCGCCATTTCAATACAGAGGTAGGGGTGGCAGGGGTGGTAGGTCGTTTAGAGGGGGTGGGCGAGGCCAGTTCAATCGCGGGAGGGGACGCGGACACTTCCCTGCTAACTCTTCTGCAACTGTCGTATCTGATGGTGTAGATTTGACTTCTGCTGCTGGGGTTACTTTAGTGGTGCAACCTTCGTCATCAACATCACCCAAACAAGCTCAAGTGCCTGGCGCACCACCACCACCACCACCACCTAAGGCATGGTGTGAAATTTGTAAGGTTGGATGTAATACTCTGGAAGTCATGGAACAACATAAGAATGGAAAGAAGCACAAGAAGAATGTGAAAGCCCGTGAAGAATTAGAGAGACAGAAGGCAATAAATGAACAAAAGAAAGAACAGATTCATACAGCTCAGCCTAAGACAGTCAAGGAGTCGGGGAACAATGGAGGCCCGCCAGAAAATATTGGCACTGAAGTTGCAGCTGCTAATCAAAATGACGAAGCACAGCTGCAGAATAACCTTGGAGAGACTTCAGCAGTTTCAGCTGAAGAGCCTGAGGGAAAATTCAGGGATAACACTGCTGGACGGGGACGGGGATTGAAGCGTAAGATGAGAGGGGGACGAGGATCTAAATCAATGAGGACTGGTGATGGATCAAGAAAGCCAGTGCAACCTCAAGCAGCCGAGCAGTTTGTGCCTTTTAAATGTGAATTGTGTAATGTCAAGTGTGAGTCCGAGGTTGTTTACCAGAGTCATGTGACCGGGAAAAAGCACTTGTCGAATCTCAAGCGTGCCCATGGCCCACAAGCTTTGTCCGGAATACTAGGGCTTCAACAAGCACTTAACCCCCCTGACATCAATGCCCTCTCAAATGCAATCAATGCTCAAGTCCAACAAGGTGATAATGATCCGCAAGTCCTTTTGGCTCAGCTTCTGATGAATGTATTATCTCAAGCACAAGCACAGGCACAAGGACAAACACCAGGAACTGCACCGCAGACTGGTCCCGTGGCTGCTCAGATGCTGGGTGCAGTGCCCTCTATTGCTGGATCCAGTTATGAACCCCAGCTGTCTCAGACACAAGCCTTGGAAATTATGGCACATGTTAATGCTCCGGAGGATTCTAACATCGGTTCCCAAAATGCAGGTGGAAATCGTGAATTGAAACAGCAGCATGAGTATCCCCAGCCTAGTTTAATTGCGACTTTATCAGACAACTCAGGGGCAGCAAATGACCAAATAGCTTCAGAGTGTGAAGCTTCCACCTCACAGAACCAAGATAAATGA | 1545 | 0.4816 | MDYSAYQQQQQQQQQQQQQAYSYEYDPSQIQAYDQSYAYQQPYYPYTQQYAYYPDPTQAHLQFQPESAPVHPPGVNPEPAPQRPTHAPTAPFQYRGRGGRGGRSFRGGGRGQFNRGRGRGHFPANSSATVVSDGVDLTSAAGVTLVVQPSSSTSPKQAQVPGAPPPPPPPKAWCEICKVGCNTLEVMEQHKNGKKHKKNVKAREELERQKAINEQKKEQIHTAQPKTVKESGNNGGPPENIGTEVAAANQNDEAQLQNNLGETSAVSAEEPEGKFRDNTAGRGRGLKRKMRGGRGSKSMRTGDGSRKPVQPQAAEQFVPFKCELCNVKCESEVVYQSHVTGKKHLSNLKRAHGPQALSGILGLQQALNPPDINALSNAINAQVQQGDNDPQVLLAQLLMNVLSQAQAQAQGQTPGTAPQTGPVAAQMLGAVPSIAGSSYEPQLSQTQALEIMAHVNAPEDSNIGSQNAGGNRELKQQHEYPQPSLIATLSDNSGAANDQIASECEASTSQNQDK | 514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip02g02533 | 514 | PANTHER | OS06G0651300 PROTEIN-RELATED | 80 | 463 | - | - | |
| Aip02g02533 | 514 | SUPERFAMILY | beta-beta-alpha zinc fingers | 164 | 203 | IPR036236 | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 225 | 243 | - | - | |
| Aip02g02533 | 514 | Pfam | Zinc-finger of C2H2 type | 173 | 196 | - | - | |
| Aip02g02533 | 514 | Pfam | Zinc-finger of C2H2 type | 320 | 344 | - | - | |
| Aip02g02533 | 514 | PANTHER | GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE | 80 | 463 | - | - | |
| Aip02g02533 | 514 | Gene3D | Classic Zinc Finger | 152 | 204 | - | - | |
| Aip02g02533 | 514 | Gene3D | Classic Zinc Finger | 305 | 351 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 263 | 311 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 70 | 86 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 269 | 284 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 55 | 128 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 459 | 514 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 148 | 168 | - | - | |
| Aip02g02533 | 514 | MobiDBLite | consensus disorder prediction | 212 | 243 | - | - | |
| Aip02g02533 | 514 | SUPERFAMILY | beta-beta-alpha zinc fingers | 299 | 351 | IPR036236 | - | |
| Aip02g02533 | 514 | SMART | ZnF_U1_5 | 169 | 203 | IPR003604 | GO:0003676|GO:0008270 | |
| Aip02g02533 | 514 | SMART | ZnF_U1_5 | 317 | 351 | IPR003604 | GO:0003676|GO:0008270 | |
| Aip02g02533 | 514 | Coils | Coil | 199 | 223 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip02g02533 | Aip-Chr2 | 99678150 | 99683519 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip02g02533 | - | - | adu:107475464 | 815.839 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip02g02533 | 02 | 99678150 | 99683519 | Aip02g02533 | 02 | 99678150 | 99683519 | ECH |