Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02476 atggagcctccgaaccagGTTGGGGAGATTATTAGCAGATTTGAGAAGAAGGGATTTTACTTGAAAAGTGTTGTTGCAACTAACCAAAAGTTGATTGGAACAACAAACCCCTTGGCATCTGAGCGTGAGCGTGAGCGTGAGCGTGGAACTATCCATGGTGACTTCGCCATTGCATTGGAAGTGTCCGTACACAACTTTCTACAGGTTGTTCTTAAATATTCCAATTTTCAAATCAAAGCTTGTGGAGAAAACATCATGTGCACTGGTGCTGAATCTCGAGGAAATATAAATGGAGATCCTATGTTGTCATCAACAAAGGTTGTTGGAAGAGATTACAATGAAGAGAGAATAATGAGAACAAGAGAAGGTGGAAATAATGAAGTAGCTTCCAACAATGGCTTATTAGCATTCATTCATGACCTTCTTTGCCGTTTCCATAATCATCTCTTTGCTCTTCTCCCCAATCTTTCTCTCTCCGAGGTGAAAGAAGAGTTGAAATCAATTGGTAAGATTTCATGCCCAATAATAATGACTAGCCTTATGATGTATTCAAGATCTGCAATCTCTTTGTTGTTCTTGGGTCGCCAAGGAAAAGTGGAGTTAGCCGGAGGATCTTTAGCACTTGGATTTGCAAACATAACCGCGAATTCAGTTCTAAAGGGCCTCACTATGGGAATGGACCCAATTTGTTGTCAAGCATATGGAGCTAAAAGATATTCACTTCTAAGTCAAACATTTTTTAGGGCAACATGTCTCCTTTTAGTTGTTGCCATGCCAATTTCAATTCTGTGGCTAAATATGGGACCCCTCCTTCAATTACTAGGTCAAGATCCACAAGTCACAAAAGTCGCACAAGTTTACATGCTTTTTTCAATTCCTGAACTCCTAGCACAAGCACACCTTAATCCATTGAGAACTTTTCTTAGGACACAAGGTTTAACCACACCAATAACCGTCATTGCTTCTTTTGCGGCGGTTTTGCACCTACCAATCAATTATTTCTTGACTATACACTTGAACTTAGGAGTCAAGGGAGTTGCCCTAGCCACCGGATTGAATTCCATTAACATGATACTTGGAATGTTGCTCTATCTTATCTTCTCGGATAAACCCTTGAAGCCTTGGCAAGAAGCTTCGGTTTCCACAGCATTTCGCGGGTGGAAACCGTTGCTAAGCTTGGCCGTGCCGAGTTGCATTTCGGTTTGCCTGGAGTGGTGGTGGTATGAAATCATGCTCTTTCTTTGTGGCCTATTGAGTAATCCACAAGCCACGGTAGCAACAATGGGAATTCTAATTCAAACACTTGCATTACTCTATGTGTTTCCATTTTCACTAAGCATTGCATTGACAACAAGAATTGGTCACTTATTAGGTGCAATTCAACCCAACAAAGCTAAGAATAGTGCCATAATTGGTTTCACTATAGCAATTATTTCAAGCATCATAGCATTCATTTTCTTAATGTTTGTGAGAAGAAATTGGGGTAAGCTCTTCACTGATGAGACACAAATCATTGATATGGTAATAAATGTGCTTCCAATATTAGGGTTGTGTGAGATTTGCAATTGGCCTCAAACAGTTTCATGTGGGATATTATCCGGTACGGCACGCCCTTACTTAGGTGCTAGGATTAATTTGTGTGCATTCTACTTAATTGGTTTGCCTGTGGCTATTTTTGCAACATTTGTGCACAAATTTGAATTGGTGGGACTATGGTTTGGAATGTTAGCAGCACAAATTTCATGTCTTTGTATGATGATATACACATTGGTAAGAACAGATTGGAGTCACCAAACTAAGAGGGCAGTGGAGTTATCATCTCAAATAACTACTACTGAAGAGGAGATAAGTATTAGTGTAAATGATGAGGAAAGTGGGTTACTTAATTCTGATCTATGA 1899 0.3934 MEPPNQVGEIISRFEKKGFYLKSVVATNQKLIGTTNPLASERERERERGTIHGDFAIALEVSVHNFLQVVLKYSNFQIKACGENIMCTGAESRGNINGDPMLSSTKVVGRDYNEERIMRTREGGNNEVASNNGLLAFIHDLLCRFHNHLFALLPNLSLSEVKEELKSIGKISCPIIMTSLMMYSRSAISLLFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAYGAKRYSLLSQTFFRATCLLLVVAMPISILWLNMGPLLQLLGQDPQVTKVAQVYMLFSIPELLAQAHLNPLRTFLRTQGLTTPITVIASFAAVLHLPINYFLTIHLNLGVKGVALATGLNSINMILGMLLYLIFSDKPLKPWQEASVSTAFRGWKPLLSLAVPSCISVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQTLALLYVFPFSLSIALTTRIGHLLGAIQPNKAKNSAIIGFTIAIISSIIAFIFLMFVRRNWGKLFTDETQIIDMVINVLPILGLCEICNWPQTVSCGILSGTARPYLGARINLCAFYLIGLPVAIFATFVHKFELVGLWFGMLAAQISCLCMMIYTLVRTDWSHQTKRAVELSSQITTTEEEISISVNDEESGLLNSDL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02476 632 Pfam MatE 396 558 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip02g02476 632 Pfam MatE 174 334 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip02g02476 632 TIGRFAM matE: MATE efflux family protein 174 572 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip02g02476 632 CDD MATE_eukaryotic 164 601 IPR045069 GO:0042910|GO:1990961
Aip02g02476 632 PANTHER PROTEIN DETOXIFICATION 53 148 612 - -
Aip02g02476 632 PANTHER MULTIDRUG RESISTANCE PROTEIN 148 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02476 Aip-Chr2 98683005 98693038 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02476 K03327 - gmx:106798137 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02476 02 98683005 98693038 Aip02g02476 02 98683005 98693038 ECH