Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02291 ATGAAGCACCACATCAGAGGAAAGCTTCCTCGCCCAATCATTATCACCACAATTTGTGTTCTTTTCTTTGTAGCTGCTTTGTATGCTGAGAGGCTCAGTCTCATTTCCTCAAGAACATCCATCTTCAACTTCAAACCATGTTCTAGGAAGTACAACAAAGCAAAATCTAATGAGAGAAAATCAGAGGAGGTGTTAGGAAATACATCATGGATTGATGATAGGTTTGATTTTGATGGTGAGGAGTGCAATGTTGCAAATGGGAAATGGGTGTTTAACAAATCAATAGAGGCTTTGTACAATGACACAAGTTGTCCCTACATAGATAGACAATATTCTTGTTTCAAAAATGGAAGGCCAGATTCTGATTTCCTCCGTTGGGAGTGGCAGCCAGAGGATTGCACCTTGCCAAGATTTAATCCAGAGGTGGCTCTGAAAAAGATTCAAGGCAAGAGGCTACTTTTCGTAGGAGATTCACTGCAGAGAAACCAATGGGAATCATTTGTGTGTTTGGTCCAAGCTATCATCCCTCGCAAGCAAAAATCTATGAAACGAGGTCGTGTTCATTCAGTTTTTAAAGCCAAGGAATATAATGCTACAATTGAATTCTATTGGGCACCATTCCTTGTTGAGTCCAACAGTGATATCCACATAATTGGAGATCCAAAGAAGAGAATAATAAAAGTTGATGCTATTCAAGAGAGAGCTAAAAACTGGACAGGGGTTGATATTCTTGTATTCAACACCTATGTTTGGTGGATGAGTGGCCTAAGAGTTAATGCATTATGGGGTTCATTTGCTAATGGAGAAGAAGGGTATGAAGAATTGGAGACACCAATTGCTTACAAATTAGGGTTGAAGACATGGGCCAATTGGGTGGACTCAACTATTGATCCTAACAAAACTCGAGTCTTCTTCACAACTATGTCCCCTGCACACACTAAAAGCGAAGAATGGGGGCACAAGGATGGTGTGAAATGCTTCAATGAGACAAAGCCAGTGAGGAAAAAGAACCATTGGGGAAGTGGTTCCAACAAGGGAATGATGAGTGTGGTGGCAAGTGTTGTGAAGAAAATGAAGGTTCCAGTGACAGTGATCAACATAACACAAATATCAGAATATAGAATTGATGGCCATTCCTCAGTTTACACGGAAACAGGTGGCAAATTGCCTCGCGAACAGCCACCCACTGTCACTATCACCACCTCTGTTCCATCTTTTCTATCGCCGGCGGCAACCACAGAGCTGTTGCCTCCCCTTGCAGAGACCACCGAAGCTCCAGCCCTTACCTCCCCTCGAGCTCACTGCTGCCTCCATCTACCAAGTGCCGCCTCGGGTAGCTCCCCCCTTCTCATTCTCAGCCACTCTAGTTCGAGCTCTGTCTCGCTCGTTTTGCTCACCACTCTAGACGAAGGTGATGATAATTCAACATCAATGTTTCACGGGAGAAATATAGGGAAGAAGAAAGAAAGGAAAACAACAAAACTCGAAGAAACAGAGGATAAGGATGTTGCCAACGTTTTGTGGCATTTGTTTGGCGAGCGTCCGTTGAATCCTCGGGATGTCATGGGGGATCCCGAGGCTTGTCGGGCGTATATTGTTGAGATGGCTGGTGGGCtgacttctctggccaggttgaaggcagcgatgggtcgggaggagggatcttcgtctccttctacccctgtctccaatcctgccgtggattctcagccagtttctcaggaggccaagtcggtgtatcgtgccctccttcggtctgctgtcgttgttcggaaggctgagCCCGTGATGGCTCAAGTTGGTTTGTTGGATAAGAAACTCCGTCATTCTCAGGCTGAGATGGTTAAGCTGAAGGAGAAGCTTGAGGCTGCCGAGATTGCGAGGGAGAAGGCAGTGAAGTCTTCTGAGGAAGCCggggcagagattctccggctttccgaggttgagacttcacttctttctcaactgggcgaggagcggcaaaaggcttctaatgtgggttcccatgctgccgtgcttctcggtgagttggaggctctgaaggccgaggttgctgccttgaagagggagaaaacggagttgctggctaatgccaaggatgcgattaccgctactgaggagacgatgaaggcacaggccctggtgttggctccgggtgtggatgtgtccgtgatgggagcgttcaagaccTCTGACTTATCGGAAAGAGGAGCAGCAAATGGCGAAGAGGTTGATGATGCCGATGAAGAACGACGAAGACTGGTGACCCCTACTGCTGCGACGAAGACGACGATAGTAACCCTTACTGCTTCGACAAGACGGCGACCCTCACAGTTGTGA 2340 0.3662 MKHHIRGKLPRPIIITTICVLFFVAALYAERLSLISSRTSIFNFKPCSRKYNKAKSNERKSEEVLGNTSWIDDRFDFDGEECNVANGKWVFNKSIEALYNDTSCPYIDRQYSCFKNGRPDSDFLRWEWQPEDCTLPRFNPEVALKKIQGKRLLFVGDSLQRNQWESFVCLVQAIIPRKQKSMKRGRVHSVFKAKEYNATIEFYWAPFLVESNSDIHIIGDPKKRIIKVDAIQERAKNWTGVDILVFNTYVWWMSGLRVNALWGSFANGEEGYEELETPIAYKLGLKTWANWVDSTIDPNKTRVFFTTMSPAHTKSEEWGHKDGVKCFNETKPVRKKNHWGSGSNKGMMSVVASVVKKMKVPVTVINITQISEYRIDGHSSVYTETGGKLPREQPPTVTITTSVPSFLSPAATTELLPPLAETTEAPALTSPRAHCCLHLPSAASGSSPLLILSHSSSSSVSLVLLTTLDEGDDNSTSMFHGRNIGKKKERKTTKLEETEDKDVANVLWHLFGERPLNPRDVMGDPEACRAYIVEMAGGLTSLARLKAAMGREEGSSSPSTPVSNPAVDSQPVSQEAKSVYRALLRSAVVVRKAEPVMAQVGLLDKKLRHSQAEMVKLKEKLEAAEIAREKAVKSSEEAGAEILRLSEVETSLLSQLGEERQKASNVGSHAAVLLGELEALKAEVAALKREKTELLANAKDAITATEETMKAQALVLAPGVDVSVMGAFKTSDLSERGAANGEEVDDADEERRRLVTPTAATKTTIVTLTASTRRRPSQL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02291 779 Pfam PMR5 N terminal Domain 80 133 IPR025846 -
Aip02g02291 779 Coils Coil 670 708 - -
Aip02g02291 779 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 5 395 IPR029962 GO:0016413
Aip02g02291 779 Coils Coil 607 634 - -
Aip02g02291 779 MobiDBLite consensus disorder prediction 549 571 - -
Aip02g02291 779 MobiDBLite consensus disorder prediction 553 571 - -
Aip02g02291 779 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 5 395 - -
Aip02g02291 779 MobiDBLite consensus disorder prediction 476 496 - -
Aip02g02291 779 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 135 387 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02291 Aip-Chr2 95378767 95394271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02291 - - gmx:100790014 687.182